The 2.0 version of rSNPBase

Variant report

Variant rs6841588
Chromosome Location chr4:149005762-149005763
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:148992200-149035000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr4:148997800-149028800 Weak transcription Pancreas Pancrea
3 chr4:148998200-149005800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr4:148998400-149032600 Weak transcription Primary B cells from peripheral blood blood
5 chr4:148998600-149005800 Weak transcription Fetal Lung lung
6 chr4:148998600-149011600 Weak transcription NHLF lung
7 chr4:148998600-149015200 Weak transcription Colon Smooth Muscle Colon
8 chr4:148999000-149014200 Weak transcription Psoas Muscle Psoas
9 chr4:148999200-149029600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr4:148999600-149024400 Weak transcription Rectal Smooth Muscle rectum
11 chr4:149002200-149011800 Weak transcription HSMM muscle
12 chr4:149002200-149029400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr4:149002600-149036600 Weak transcription Placenta Amnion Placenta Amnion
14 chr4:149002800-149010800 Weak transcription HSMMtube muscle
15 chr4:149002800-149012800 Weak transcription Brain Hippocampus Middle brain
16 chr4:149002800-149013400 Weak transcription Duodenum Mucosa Duodenum
17 chr4:149002800-149018400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr4:149003000-149012400 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr4:149003000-149012600 Weak transcription NHDF-Ad bronchial
20 chr4:149003000-149013400 Weak transcription Liver Liver
21 chr4:149003000-149028800 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr4:149003000-149029200 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr4:149003200-149011600 Weak transcription Left Ventricle heart
24 chr4:149003200-149011800 Weak transcription Right Ventricle heart
25 chr4:149003200-149012000 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr4:149003200-149012200 Weak transcription Gastric stomach
27 chr4:149003200-149012400 Weak transcription Adipose Nuclei Adipose
28 chr4:149003200-149025400 Weak transcription Primary T cells fromperipheralblood blood
29 chr4:149003400-149012400 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr4:149003400-149027200 Weak transcription Fetal Intestine Large intestine
31 chr4:149003600-149006200 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr4:149003600-149011400 Weak transcription Colonic Mucosa Colon
33 chr4:149003800-149012000 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr4:149003800-149029400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr4:149004000-149011600 Weak transcription Spleen Spleen
36 chr4:149004000-149011800 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr4:149004000-149014000 Weak transcription Ovary ovary
38 chr4:149004000-149018400 Weak transcription Aorta Aorta
39 chr4:149004000-149029200 Weak transcription Primary T helper cells PMA-I stimulated --
40 chr4:149004200-149011000 Weak transcription Fetal Muscle Leg muscle
41 chr4:149004200-149011000 Weak transcription Stomach Smooth Muscle stomach
42 chr4:149004200-149013400 Weak transcription Muscle Satellite Cultured Cells --
43 chr4:149004200-149019600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr4:149004400-149010400 Weak transcription Lung lung
45 chr4:149004600-149006000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr4:149004600-149010600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr4:149004600-149011000 Weak transcription Fetal Stomach stomach
48 chr4:149004600-149011200 Weak transcription Fetal Muscle Trunk muscle
49 chr4:149004600-149011600 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr4:149004600-149011800 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015