Variant report

Variant rs6858382
Chromosome Location chr4:148996004-148996005
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:148966600-149003800 Weak transcription NH-A brain
2 chr4:148968400-149004000 Weak transcription HUVEC blood vessel
3 chr4:148982000-149001200 Weak transcription Placenta Amnion Placenta Amnion
4 chr4:148982200-148996200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr4:148983400-148996200 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr4:148984200-149003400 Weak transcription Stomach Mucosa stomach
7 chr4:148984400-148996400 Weak transcription Fetal Kidney kidney
8 chr4:148987000-148996200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr4:148988800-149004400 Weak transcription Brain Anterior Caudate brain
10 chr4:148989400-148997800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr4:148991200-148997200 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr4:148991200-148997600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr4:148992000-148997800 Weak transcription Right Atrium heart
14 chr4:148992200-149035000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr4:148992600-148996200 Strong transcription Stomach Smooth Muscle stomach
16 chr4:148993000-148997400 Strong transcription NHLF lung
17 chr4:148993200-148997400 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
18 chr4:148993400-148996400 Genic enhancers Skeletal Muscle Female skeletal muscle
19 chr4:148993400-148997000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr4:148993400-148997400 Genic enhancers Skeletal Muscle Male skeletal muscle
21 chr4:148993400-148998000 Strong transcription Muscle Satellite Cultured Cells --
22 chr4:148993400-148999200 Strong transcription Ovary ovary
23 chr4:148993600-148996800 ZNF genes & repeats Aorta Aorta
24 chr4:148993600-148997200 ZNF genes & repeats Thymus Thymus
25 chr4:148993600-148998200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr4:148993600-148998200 Strong transcription HSMM muscle
27 chr4:148993600-148998600 Strong transcription Colon Smooth Muscle Colon
28 chr4:148993800-148996600 ZNF genes & repeats GM12878-XiMat blood
29 chr4:148993800-148997200 Strong transcription Fetal Intestine Large intestine
30 chr4:148993800-148997400 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
31 chr4:148994000-148997400 ZNF genes & repeats Primary T cells fromperipheralblood blood
32 chr4:148994000-148997400 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
33 chr4:148994200-148997400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
34 chr4:148994200-148998000 ZNF genes & repeats Primary T helper 17 cells PMA-I stimulated --
35 chr4:148994200-149004800 Weak transcription Brain Substantia Nigra brain
36 chr4:148994400-148997200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
37 chr4:148994400-148997400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr4:148994400-148999200 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
39 chr4:148994600-148996800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr4:148994600-148997200 ZNF genes & repeats Primary T helper memory cells from peripheral blood 1 blood
41 chr4:148994600-148997400 ZNF genes & repeats Primary T cells from cord blood blood
42 chr4:148994600-148997400 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
43 chr4:148994600-148998400 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
44 chr4:148994600-148998600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
45 chr4:148994600-149002200 Weak transcription NHDF-Ad bronchial
46 chr4:148994600-149003000 Weak transcription HMEC breast
47 chr4:148994800-148996600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr4:148994800-148996800 ZNF genes & repeats Primary T helper naive cells from peripheral blood blood
49 chr4:148994800-148997000 Weak transcription Pancreas Pancrea
50 chr4:148994800-148997400 Strong transcription HSMMtube muscle

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