Variant report

Variant	rs7666483
Chromosome Location	chr4:148990642-148990643
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:148986584..148989097-chr4:148989304..148991329,2	K562	blood:

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs17024360	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs5536	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57831907	1.00[AMR][1000 genomes]
rs6812538	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6818829	1.00[AMR][1000 genomes]
rs6822617	1.00[AMR][1000 genomes]
rs6831382	1.00[AMR][1000 genomes]
rs6835464	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6841588	1.00[EUR][1000 genomes]
rs6846848	1.00[AMR][1000 genomes]
rs6854073	1.00[AMR][1000 genomes]
rs6858382	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6858669	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72945916	1.00[AMR][1000 genomes]
rs7666432	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7683313	1.00[EUR][1000 genomes]
rs7694414	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:93 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:148952000-148993600	Weak transcription	NHDF-Ad	bronchial
2	chr4:148960000-148993200	Weak transcription	Thymus	Thymus
3	chr4:148966600-149003800	Weak transcription	NH-A	brain
4	chr4:148968400-149004000	Weak transcription	HUVEC	blood vessel
5	chr4:148978400-148993200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr4:148978600-148991000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
7	chr4:148978800-148994000	Weak transcription	Primary monocytes fromperipheralblood	blood
8	chr4:148980200-148991400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
9	chr4:148981000-148992000	Weak transcription	Brain Germinal Matrix	brain
10	chr4:148981400-148994400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr4:148981800-148993600	Strong transcription	Aorta	Aorta
12	chr4:148982000-148994400	Weak transcription	HUES64 Cell Line	embryonic stem cell
13	chr4:148982000-149001200	Weak transcription	Placenta Amnion	Placenta Amnion
14	chr4:148982200-148994000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
15	chr4:148982200-148996200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr4:148982600-148991400	Weak transcription	Fetal Thymus	thymus
17	chr4:148982600-148993600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr4:148982600-148994000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
19	chr4:148983000-148993800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
20	chr4:148983200-148993200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
21	chr4:148983200-148993400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
22	chr4:148983200-148995000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
23	chr4:148983400-148994600	Weak transcription	Primary T helper cells fromperipheralblood	blood
24	chr4:148983400-148995600	Weak transcription	Colonic Mucosa	Colon
25	chr4:148983400-148996200	Weak transcription	Rectal Mucosa Donor 29	rectum
26	chr4:148983600-148991000	Weak transcription	Rectal Mucosa Donor 31	rectum
27	chr4:148983600-148993600	Weak transcription	HUES6 Cell Line	embryonic stem cell
28	chr4:148983600-148993800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
29	chr4:148983600-148994200	Weak transcription	Sigmoid Colon	Sigmoid Colon
30	chr4:148983600-148994400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
31	chr4:148984200-148993400	Weak transcription	Duodenum Mucosa	Duodenum
32	chr4:148984200-149003400	Weak transcription	Stomach Mucosa	stomach
33	chr4:148984400-148996400	Weak transcription	Fetal Kidney	kidney
34	chr4:148985000-148994800	Weak transcription	Primary T helper cells PMA-I stimulated	--
35	chr4:148985400-148990800	Weak transcription	Duodenum Smooth Muscle	Duodenum
36	chr4:148985800-148992200	Enhancers	Ovary	ovary
37	chr4:148986200-148993000	Weak transcription	Primary T cells fromperipheralblood	blood
38	chr4:148986400-148995600	Weak transcription	Monocytes-CD14+_RO01746	blood
39	chr4:148986600-148995200	Weak transcription	Osteobl	bone
40	chr4:148986600-148995600	Weak transcription	Pancreatic Islets	Pancreatic Islet
41	chr4:148986800-148991400	Weak transcription	Rectal Smooth Muscle	rectum
42	chr4:148986800-148992200	Weak transcription	Brain Cingulate Gyrus	brain
43	chr4:148986800-148993000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
44	chr4:148986800-148993800	Weak transcription	Fetal Intestine Large	intestine
45	chr4:148987000-148995600	Weak transcription	Brain Hippocampus Middle	brain
46	chr4:148987000-148996200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
47	chr4:148987400-148992800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
48	chr4:148987400-148993400	Enhancers	Skeletal Muscle Male	skeletal muscle
49	chr4:148987600-148992000	Enhancers	Right Atrium	heart
50	chr4:148987600-148992200	Enhancers	Right Ventricle	heart

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