Variant report
| Variant | rs6846293 |
|---|---|
| Chromosome Location | chr4:100664582-100664583 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr4:100661884..100664648-chr4:100870323..100871859,2 | K562 | blood: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000245322 | Chromatin interaction |
| ENSG00000164032 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:19)
| rs_ID | r2[population] |
|---|---|
| rs1108961 | 0.90[YRI][hapmap] |
| rs11722443 | 0.88[EUR][1000 genomes] |
| rs11727560 | 0.92[EUR][1000 genomes] |
| rs11729858 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes] |
| rs12642668 | 0.88[EUR][1000 genomes] |
| rs12643245 | 0.88[EUR][1000 genomes] |
| rs13111133 | 0.88[EUR][1000 genomes] |
| rs13111603 | 0.81[EUR][1000 genomes] |
| rs13124255 | 0.84[CHB][hapmap] |
| rs13150247 | 0.88[EUR][1000 genomes] |
| rs1426734 | 0.88[EUR][1000 genomes] |
| rs17029387 | 0.81[EUR][1000 genomes] |
| rs1816197 | 0.88[EUR][1000 genomes] |
| rs1834659 | 0.88[EUR][1000 genomes] |
| rs56411289 | 0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes] |
| rs61705069 | 0.88[EUR][1000 genomes] |
| rs71614614 | 0.96[EUR][1000 genomes];0.95[ASN][1000 genomes] |
| rs71614615 | 0.96[EUR][1000 genomes];0.95[ASN][1000 genomes] |
| rs7670607 | 0.83[CHB][hapmap] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
