Variant report

No.	Distal block	Cell Line	Cell type
1	chr4:129164832..129166903-chr4:129171386..129173303,2	MCF-7	breast:
2	chr4:129160558..129162519-chr4:129164377..129167421,4	K562	blood:
3	chr4:129157638..129160508-chr4:129163340..129166117,2	K562	blood:

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10002814	0.94[EUR][1000 genomes]
rs11098951	0.81[ASN][1000 genomes]
rs11098953	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11098954	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11728141	0.88[ASN][1000 genomes]
rs12650034	0.88[ASN][1000 genomes]
rs13103317	0.87[ASN][1000 genomes]
rs1391980	0.81[ASN][1000 genomes]
rs1829726	0.87[ASN][1000 genomes]
rs1851399	0.88[ASN][1000 genomes]
rs2036687	0.88[ASN][1000 genomes]
rs2101808	0.88[ASN][1000 genomes]
rs2202805	0.86[ASN][1000 genomes]
rs2391257	0.88[ASN][1000 genomes]
rs28609279	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs290004	0.92[ASN][1000 genomes]
rs34837036	0.95[ASN][1000 genomes]
rs3755896	0.88[ASN][1000 genomes]
rs4016	0.88[ASN][1000 genomes]
rs430431	0.88[ASN][1000 genomes]
rs4975180	0.88[ASN][1000 genomes]
rs4975299	0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62318161	0.87[ASN][1000 genomes]
rs6814132	0.87[ASN][1000 genomes]
rs6816625	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6842987	0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs7666566	0.88[ASN][1000 genomes]
rs9790593	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3390887	chr4:128932563-129207255	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:129162800-129166000	Enhancers	NHDF-Ad	bronchial
2	chr4:129164400-129166000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr4:129165200-129165800	Enhancers	NHEK	skin
4	chr4:129165400-129165800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr4:129165400-129165800	Enhancers	NHLF	lung
6	chr4:129165400-129165800	Enhancers	Osteobl	bone
7	chr4:129165400-129166000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr4:129165600-129165800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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