Variant report

Variant	rs6906829
Chromosome Location	chr6:54877465-54877466
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 49 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:49)

rs_ID	r²[population]
rs10456178	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10948881	0.85[ASN][1000 genomes]
rs11966562	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs12192396	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12213653	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs13208701	0.80[ASN][1000 genomes]
rs3105258	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3125276	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4078034	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4283890	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4296890	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4339456	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4398735	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4438959	0.86[EUR][1000 genomes]
rs4454122	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4484524	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4492195	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4518493	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4518494	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4563716	0.81[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs4601130	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4601131	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4636027	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4712085	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4712086	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4715497	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4715498	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4715504	0.81[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs62416360	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs62416378	0.82[AMR][1000 genomes]
rs62416556	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6907460	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6908172	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6918018	0.81[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs6920563	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7746448	0.99[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7753352	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7755108	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7760318	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9357829	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs9357831	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9367608	0.88[ASN][1000 genomes]
rs9370364	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9370373	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9382434	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9382442	0.81[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs9396032	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9464180	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9475127	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:54876600-54877600	Enhancers	Placenta Amnion	Placenta Amnion
2	chr6:54876800-54879000	Weak transcription	Skeletal Muscle Male	skeletal muscle
3	chr6:54877000-54878400	Weak transcription	Fetal Lung	lung
4	chr6:54877200-54881200	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr6:54877400-54877600	Enhancers	Fetal Brain Male	brain

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