The 2.0 version of rSNPBase

Variant report

Variant rs6918039
Chromosome Location chr6:37115993-37115994
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:37105400-37116200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr6:37105800-37116200 Weak transcription Duodenum Mucosa Duodenum
3 chr6:37106000-37116200 Weak transcription Esophagus oesophagus
4 chr6:37106200-37116200 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr6:37109800-37116200 Weak transcription Brain Angular Gyrus brain
6 chr6:37109800-37116200 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr6:37109800-37116200 Weak transcription Stomach Smooth Muscle stomach
8 chr6:37110200-37116200 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr6:37110200-37116200 Weak transcription Brain Hippocampus Middle brain
10 chr6:37110400-37116200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr6:37110400-37116200 Weak transcription Colon Smooth Muscle Colon
12 chr6:37110400-37125200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr6:37110400-37136800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr6:37111400-37116200 Enhancers Liver Liver
15 chr6:37112600-37116200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr6:37112800-37116200 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr6:37112800-37117600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr6:37112800-37122800 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr6:37112800-37136000 Weak transcription H9 Cell Line embryonic stem cell
20 chr6:37113000-37116200 Weak transcription Aorta Aorta
21 chr6:37113400-37116200 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr6:37113400-37117600 Weak transcription Osteobl bone
23 chr6:37113600-37116200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr6:37113600-37116200 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr6:37113600-37116200 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr6:37113600-37116200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
27 chr6:37113600-37117600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr6:37113600-37117600 Weak transcription GM12878-XiMat blood
29 chr6:37113600-37123000 Weak transcription H1 Cell Line embryonic stem cell
30 chr6:37113800-37116200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr6:37113800-37122800 Weak transcription A549 lung
32 chr6:37114800-37116200 Weak transcription Placenta Placenta
33 chr6:37114800-37117600 Weak transcription NHLF lung
34 chr6:37115200-37116200 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr6:37115400-37116600 Enhancers Fetal Intestine Small intestine
36 chr6:37115600-37116000 Weak transcription Fetal Intestine Large intestine
37 chr6:37115600-37116000 Weak transcription Psoas Muscle Psoas
38 chr6:37115600-37116200 Weak transcription Left Ventricle heart
39 chr6:37115800-37116200 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr6:37115800-37116200 Weak transcription Fetal Muscle Leg muscle
41 chr6:37115800-37116200 Enhancers K562 blood
42 chr6:37115800-37116400 Enhancers Small Intestine intestine
43 chr6:37115800-37116400 Enhancers Stomach Mucosa stomach
44 chr6:37115800-37116600 Flanking Active TSS HepG2 liver
45 chr6:37115800-37117400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015