Variant report

No.	Distal block	Cell Line	Cell type
1	6:132269655-132282174..6:132550513-132556576	GM12878	blood:
2	6:132182612-132191683..6:132550513-132556576	GM12878	blood:
3	6:132176847-132180372..6:132550513-132556576	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10080410	0.81[AFR][1000 genomes]
rs10085235	1.00[YRI][hapmap];0.81[AFR][1000 genomes]
rs12111309	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13437394	1.00[YRI][hapmap]
rs13437560	1.00[YRI][hapmap];0.81[AFR][1000 genomes]
rs57178246	0.81[AFR][1000 genomes]
rs60216627	0.81[AFR][1000 genomes]
rs6569785	1.00[YRI][hapmap];0.87[AFR][1000 genomes]
rs6569786	0.87[AFR][1000 genomes]
rs6918490	1.00[YRI][hapmap];0.81[AFR][1000 genomes]
rs6918720	0.81[AFR][1000 genomes]
rs7745723	0.81[AFR][1000 genomes]
rs7762252	0.81[AFR][1000 genomes]
rs7772465	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9321335	1.00[YRI][hapmap];0.87[AFR][1000 genomes]
rs9493247	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9493259	1.00[YRI][hapmap];0.81[AFR][1000 genomes]
rs9493268	0.81[AFR][1000 genomes]
rs9493270	0.81[AFR][1000 genomes]
rs9493274	0.85[YRI][hapmap];0.81[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762616	chr6:132404708-132584324	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases
2	nsv1024527	chr6:132532941-132571889	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:132549200-132553000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr6:132549400-132556000	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chr6:132550800-132555600	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr6:132550800-132557000	Weak transcription	NH-A	brain
5	chr6:132551000-132555600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr6:132551600-132553800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr6:132551800-132553000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr6:132552200-132562400	Weak transcription	Psoas Muscle	Psoas
9	chr6:132552800-132556600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr6:132552800-132556800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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