The 2.0 version of rSNPBase

Variant report

Variant rs6930549
Chromosome Location chr6:133111233-133111234
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:133083800-133118200 Weak transcription Brain Cingulate Gyrus brain
2 chr6:133085000-133114600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
3 chr6:133085000-133119000 Weak transcription Thymus Thymus
4 chr6:133085200-133112200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr6:133085200-133119400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr6:133085400-133114400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr6:133085600-133118800 Weak transcription Colon Smooth Muscle Colon
8 chr6:133085800-133119000 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr6:133086000-133112800 Weak transcription Hela-S3 cervix
10 chr6:133086000-133113800 Weak transcription NHEK skin
11 chr6:133086000-133118800 Weak transcription Fetal Kidney kidney
12 chr6:133088600-133114600 Weak transcription Brain Inferior Temporal Lobe brain
13 chr6:133089400-133111800 Weak transcription Lung lung
14 chr6:133089400-133119400 Weak transcription Gastric stomach
15 chr6:133089600-133111400 Weak transcription Primary hematopoietic stem cells short term culture blood
16 chr6:133089600-133111400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr6:133089600-133111800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr6:133089600-133118800 Weak transcription Fetal Heart heart
19 chr6:133089600-133119000 Weak transcription Primary hematopoietic stem cells blood
20 chr6:133089600-133119200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr6:133089600-133119200 Weak transcription Right Ventricle heart
22 chr6:133089600-133119200 Weak transcription Stomach Mucosa stomach
23 chr6:133089600-133119400 Weak transcription Pancreas Pancrea
24 chr6:133089800-133118200 Weak transcription Fetal Brain Male brain
25 chr6:133089800-133118800 Weak transcription Brain Angular Gyrus brain
26 chr6:133090000-133118800 Weak transcription HepG2 liver
27 chr6:133090400-133114200 Strong transcription Primary T helper cells fromperipheralblood blood
28 chr6:133091800-133119000 Weak transcription Psoas Muscle Psoas
29 chr6:133098400-133119000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr6:133098400-133119000 Weak transcription Brain Substantia Nigra brain
31 chr6:133098600-133118800 Weak transcription Pancreatic Islets Pancreatic Islet
32 chr6:133099000-133113000 Strong transcription Fetal Intestine Large intestine
33 chr6:133100400-133112000 Weak transcription Adipose Nuclei Adipose
34 chr6:133100400-133114000 Weak transcription Spleen Spleen
35 chr6:133100400-133114200 Weak transcription Fetal Brain Female brain
36 chr6:133100400-133114400 Weak transcription Brain Hippocampus Middle brain
37 chr6:133100400-133118600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr6:133100400-133118800 Weak transcription Primary T helper naive cells from peripheral blood blood
39 chr6:133100400-133119000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr6:133100600-133111400 Weak transcription Monocytes-CD14+_RO01746 blood
41 chr6:133100600-133111600 Weak transcription Primary monocytes fromperipheralblood blood
42 chr6:133100600-133113600 Weak transcription HMEC breast
43 chr6:133100600-133114600 Weak transcription H9 Cell Line embryonic stem cell
44 chr6:133100600-133114600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr6:133100600-133118000 Weak transcription Small Intestine intestine
46 chr6:133100600-133118200 Weak transcription Primary T killer naive cells fromperipheralblood blood
47 chr6:133100600-133118800 Weak transcription H1 Cell Line embryonic stem cell
48 chr6:133100600-133118800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr6:133100600-133118800 Weak transcription Rectal Smooth Muscle rectum
50 chr6:133100600-133119000 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015