Variant report

No.	Distal block	Cell Line	Cell type
1	chr7:80761023..80762891-chr7:80768452..80770762,2	MCF-7	breast:
2	chr7:80762464..80764169-chr7:80767281..80770291,3	K562	blood:
3	chr7:80762464..80764120-chr7:80767823..80770291,2	K562	blood:
4	chr7:80768507..80770416-chr7:80771855..80773597,2	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1024548	0.81[CEU][hapmap]
rs10264882	0.85[CEU][hapmap];0.93[ASN][1000 genomes]
rs10272094	0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11972689	0.80[CEU][hapmap]
rs13228254	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13242185	0.81[CEU][hapmap];0.93[ASN][1000 genomes]
rs1605917	0.93[ASN][1000 genomes]
rs17616148	0.82[CEU][hapmap];0.93[ASN][1000 genomes]
rs1859678	0.93[ASN][1000 genomes]
rs327705	0.81[CEU][hapmap]
rs327710	0.85[CEU][hapmap]
rs34252288	0.93[ASN][1000 genomes]
rs35141375	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs56034302	0.93[ASN][1000 genomes]
rs62467422	0.93[ASN][1000 genomes]
rs6467590	0.93[ASN][1000 genomes]
rs6957595	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7779992	0.93[ASN][1000 genomes]
rs7795202	0.86[ASN][1000 genomes]
rs980966	0.81[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1034690	chr7:80520004-80987682	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
2	nsv888556	chr7:80695828-80797794	Weak transcription Enhancers Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
3	nsv831044	chr7:80721773-80918591	Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:80763200-80780200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr7:80767800-80769800	Enhancers	Monocytes-CD14+_RO01746	blood
3	chr7:80768000-80769000	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chr7:80768000-80770200	Enhancers	Primary neutrophils fromperipheralblood	blood
5	chr7:80768000-80771000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr7:80768200-80770800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr7:80768200-80771000	Enhancers	Primary hematopoietic stem cells short term culture	blood
8	chr7:80768200-80771000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr7:80768600-80770400	Enhancers	Fetal Lung	lung

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