Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs1094605	0.96[ASN][1000 genomes]
rs1606478	0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1606479	0.94[EUR][1000 genomes]
rs1611855	0.94[EUR][1000 genomes]
rs1671886	0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1708119	0.84[ASN][1000 genomes]
rs1708144	0.94[EUR][1000 genomes]
rs55675454	0.94[EUR][1000 genomes]
rs55727454	0.94[EUR][1000 genomes]
rs6794105	0.95[EUR][1000 genomes]
rs696505	0.91[EUR][1000 genomes]
rs696506	0.92[EUR][1000 genomes]
rs696507	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs696510	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs696511	0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs698227	0.92[EUR][1000 genomes]
rs698229	0.95[EUR][1000 genomes]
rs698230	0.95[EUR][1000 genomes]
rs698231	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs822764	0.92[EUR][1000 genomes]
rs822765	0.92[EUR][1000 genomes]
rs822766	0.92[EUR][1000 genomes]
rs822767	0.94[EUR][1000 genomes]
rs861090	0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1014828	chr3:22554271-23033498	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv1008306	chr3:22762892-23026548	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:22956600-22958000	Weak transcription	Ovary	ovary
2	chr3:22956600-22958400	Weak transcription	Fetal Lung	lung

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