Variant report

Variant	rs7034490
Chromosome Location	chr9:92736204-92736205
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10491802	0.89[EUR][1000 genomes]
rs16906005	0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35957386	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4744296	0.94[ASN][1000 genomes]
rs57948814	0.94[ASN][1000 genomes]
rs6479587	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67438728	0.97[ASN][1000 genomes]
rs7030989	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7030995	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7041200	0.97[ASN][1000 genomes]
rs7045450	0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7045961	0.94[ASN][1000 genomes]
rs721832	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7850391	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7868721	0.94[ASN][1000 genomes]
rs7868852	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893561	chr9:92732368-92802101	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:92725600-92738200	Weak transcription	Lung	lung
2	chr9:92733000-92736600	Weak transcription	Primary monocytes fromperipheralblood	blood
3	chr9:92733400-92740200	Weak transcription	Monocytes-CD14+_RO01746	blood
4	chr9:92733800-92738000	Weak transcription	Fetal Intestine Small	intestine

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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