Variant report

Variant	rs7037172
Chromosome Location	chr9:100725476-100725477
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:7)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:7 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:100717154..100719569-chr9:100723550..100725894,3	K562	blood:
2	chr9:100701173..100704180-chr9:100725038..100729962,4	K562	blood:
3	chr9:100681341..100688036-chr9:100719041..100726043,8	K562	blood:
4	chr9:100713086..100729092-chr9:100738274..100752806,69	K562	blood:
5	chr9:100703047..100707338-chr9:100720648..100725664,5	K562	blood:
6	chr9:100704233..100707185-chr9:100722015..100725827,3	K562	blood:
7	chr9:100681285..100688110-chr9:100720096..100725626,14	K562	blood:

No data

Variant related genes	Relation type
ENSG00000236896	Chromatin interaction
ENSG00000136932	Chromatin interaction
ENSG00000136929	Chromatin interaction
ENSG00000136938	Chromatin interaction

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10512256	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1059003	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10984098	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs10984377	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10984516	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10984522	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10984532	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10984545	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12156487	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12375612	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12376113	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1348387	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17687621	0.98[EUR][1000 genomes]
rs1947015	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4514106	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4742708	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4743143	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4743144	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4743149	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs55978521	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72753537	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs72753557	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72753579	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72753581	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72753588	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7851498	0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7854948	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893611	chr9:100561055-100739888	Flanking Bivalent TSS/Enh Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:100721800-100726200	Weak transcription	HSMMtube	muscle
2	chr9:100722400-100727400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
3	chr9:100722600-100730800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr9:100723800-100725800	Enhancers	Brain Germinal Matrix	brain
5	chr9:100725200-100729600	Enhancers	K562	blood

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