Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:44811931..44814471-chr10:44815222..44820050,4	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11238983	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs1159931	0.83[CHD][hapmap];0.86[JPT][hapmap]
rs11814779	0.96[ASN][1000 genomes]
rs12265086	0.90[EUR][1000 genomes]
rs12265306	0.93[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs1746052	0.81[CHD][hapmap];0.95[JPT][hapmap]
rs2146807	1.00[CEU][hapmap];1.00[TSI][hapmap];0.92[EUR][1000 genomes]
rs2209065	0.85[CHD][hapmap];0.86[JPT][hapmap]
rs3740084	0.87[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs4491167	1.00[CEU][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs487465	0.95[JPT][hapmap]
rs573141	0.95[JPT][hapmap]
rs607363	0.83[CHD][hapmap];0.95[JPT][hapmap]
rs61856381	0.93[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs620356	0.95[JPT][hapmap]
rs620828	0.95[JPT][hapmap]
rs634963	0.95[JPT][hapmap]
rs67379075	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs694425	0.95[JPT][hapmap]
rs800330	0.81[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1038511	chr10:44596885-44870030	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs7082209	ZNF22	cis	parietal	SCAN

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44806600-44820800	Weak transcription	Right Atrium	heart
2	chr10:44807200-44822200	Weak transcription	Left Ventricle	heart
3	chr10:44807600-44820800	Weak transcription	Skeletal Muscle Male	skeletal muscle
4	chr10:44808000-44820000	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr10:44812800-44817200	Weak transcription	Placenta	Placenta

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