Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10501551	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1483394	0.83[CEU][hapmap];0.85[JPT][hapmap]
rs1483395	0.83[CEU][hapmap];0.89[JPT][hapmap]
rs1557432	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1973692	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1973693	0.93[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs2625522	0.83[CEU][hapmap];0.82[CHB][hapmap];0.89[JPT][hapmap]
rs2675717	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs2675718	0.83[CEU][hapmap];0.82[CHB][hapmap];0.89[JPT][hapmap]
rs2852735	0.82[CHB][hapmap];0.89[JPT][hapmap]
rs2852736	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs4944454	0.82[CHB][hapmap];0.89[JPT][hapmap];0.82[ASN][1000 genomes]
rs6592152	0.85[AMR][1000 genomes]
rs790343	0.94[CEU][hapmap];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs790345	0.84[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs790353	0.84[AMR][1000 genomes]
rs790357	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs790361	0.82[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap]
rs790362	0.83[CEU][hapmap];0.82[CHB][hapmap]
rs7926735	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs809844	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv468765	chr11:83591584-83620940	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv555607	chr11:83591584-83620940	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83606200-83608800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr11:83606400-83608400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr11:83606600-83607800	Enhancers	Brain Cingulate Gyrus	brain
4	chr11:83606800-83608400	Enhancers	Brain Substantia Nigra	brain
5	chr11:83607000-83608000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr11:83607000-83611400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr11:83607200-83608400	Enhancers	Brain Hippocampus Middle	brain
8	chr11:83607200-83628800	Weak transcription	Brain Angular Gyrus	brain
9	chr11:83607400-83607800	Weak transcription	Brain Inferior Temporal Lobe	brain

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