Variant report

Variant	rs7086272
Chromosome Location	chr10:112888312-112888313
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:112886782..112889479-chr10:112895290..112897533,2	K562	blood:

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs36069680	1.00[AMR][1000 genomes]
rs56706993	1.00[AMR][1000 genomes]
rs57228376	1.00[AMR][1000 genomes]
rs57954412	1.00[AMR][1000 genomes]
rs6585035	1.00[AMR][1000 genomes]
rs6585036	1.00[AMR][1000 genomes]
rs7097209	1.00[AMR][1000 genomes]
rs73347769	1.00[AMR][1000 genomes]
rs73347774	1.00[AMR][1000 genomes]
rs73347789	1.00[AMR][1000 genomes]
rs73347799	1.00[AMR][1000 genomes]
rs73349707	1.00[AMR][1000 genomes]
rs73349714	1.00[AMR][1000 genomes]
rs73349721	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498045	chr10:112794518-113353550	Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:112872600-112889200	Weak transcription	Pancreas	Pancrea
2	chr10:112882400-112889000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr10:112885400-112888800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr10:112886000-112889600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr10:112886000-112889600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr10:112886400-112888800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr10:112886400-112888800	Weak transcription	NHDF-Ad	bronchial
8	chr10:112886800-112888800	Enhancers	K562	blood
9	chr10:112887400-112891200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
10	chr10:112887600-112889200	Enhancers	ES-I3 Cell Line	embryonic stem cell
11	chr10:112887800-112889000	Enhancers	Primary hematopoietic stem cells	blood
12	chr10:112887800-112889600	Enhancers	iPS-18 Cell Line	embryonic stem cell
13	chr10:112887800-112889800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
14	chr10:112887800-112890600	Enhancers	Fetal Muscle Leg	muscle
15	chr10:112887800-112891200	Enhancers	HUES48 Cell Line	embryonic stem cell
16	chr10:112887800-112891200	Enhancers	HUES6 Cell Line	embryonic stem cell
17	chr10:112888000-112888400	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
18	chr10:112888000-112888800	Weak transcription	H9 Cell Line	embryonic stem cell
19	chr10:112888000-112889800	Enhancers	iPS-20b Cell Line	embryonic stem cell
20	chr10:112888200-112888400	Active TSS	Osteobl	bone
21	chr10:112888200-112888600	Enhancers	HUES64 Cell Line	embryonic stem cell
22	chr10:112888200-112888600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
23	chr10:112888200-112888600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr10:112888200-112888600	Active TSS	Adipose Nuclei	Adipose
25	chr10:112888200-112888600	Bivalent Enhancer	Fetal Stomach	stomach
26	chr10:112888200-112888600	Active TSS	Psoas Muscle	Psoas
27	chr10:112888200-112888800	Active TSS	Brain Hippocampus Middle	brain
28	chr10:112888200-112888800	Active TSS	Skeletal Muscle Male	skeletal muscle
29	chr10:112888200-112889200	Enhancers	iPS-15b Cell Line	embryonic stem cell
30	chr10:112888200-112889800	Enhancers	Brain Angular Gyrus	brain
31	chr10:112888200-112891400	Enhancers	H1 Cell Line	embryonic stem cell
32	chr10:112888200-112891600	Enhancers	Stomach Mucosa	stomach

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