Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs16926240	0.87[AFR][1000 genomes]
rs17737176	0.97[EUR][1000 genomes]
rs17737261	0.96[EUR][1000 genomes]
rs55752620	0.87[AFR][1000 genomes]
rs55945306	0.89[EUR][1000 genomes]
rs56386940	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs58949541	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs59190298	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs61613087	0.88[AFR][1000 genomes]
rs61846881	0.97[EUR][1000 genomes]
rs61846904	0.85[AFR][1000 genomes]
rs61846905	0.97[EUR][1000 genomes]
rs61846907	0.81[AFR][1000 genomes]
rs6482509	0.88[AFR][1000 genomes]
rs7070879	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7076933	0.88[AFR][1000 genomes]
rs7094086	0.95[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7098875	0.88[AFR][1000 genomes]
rs7099100	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs722969	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7906914	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9664692	0.84[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1044482	chr10:25889919-25977270	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:25962800-25993600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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