Variant report
| Variant | rs7108135 |
|---|---|
| Chromosome Location | chr11:8402917-8402918 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:42)
| rs_ID | r2[population] |
|---|---|
| rs10769912 | 1.00[CHB][hapmap] |
| rs10840032 | 0.82[ASW][hapmap] |
| rs10840044 | 0.88[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs10840045 | 0.85[EUR][1000 genomes] |
| rs10840046 | 1.00[CHB][hapmap] |
| rs10840048 | 1.00[CHB][hapmap] |
| rs10840049 | 1.00[CHB][hapmap] |
| rs10840053 | 1.00[CHB][hapmap] |
| rs10840059 | 1.00[CHB][hapmap] |
| rs10840069 | 1.00[CHB][hapmap] |
| rs10840071 | 1.00[CHB][hapmap] |
| rs10840074 | 1.00[CHB][hapmap] |
| rs11041908 | 0.95[ASN][1000 genomes] |
| rs11041923 | 1.00[CHB][hapmap] |
| rs11041928 | 1.00[CHB][hapmap] |
| rs11041938 | 1.00[CHB][hapmap] |
| rs11041942 | 1.00[CHB][hapmap] |
| rs11041945 | 1.00[CHB][hapmap] |
| rs11041946 | 1.00[CHB][hapmap] |
| rs11041948 | 1.00[CHB][hapmap] |
| rs11041987 | 1.00[CHB][hapmap] |
| rs11041988 | 1.00[CHB][hapmap] |
| rs11041989 | 1.00[CHB][hapmap] |
| rs11041992 | 1.00[CHB][hapmap] |
| rs11512437 | 1.00[CHB][hapmap] |
| rs12276661 | 1.00[CHB][hapmap] |
| rs12281285 | 1.00[CHB][hapmap] |
| rs12282398 | 1.00[CHB][hapmap] |
| rs12283443 | 1.00[CHB][hapmap] |
| rs12289533 | 1.00[CHB][hapmap] |
| rs12361165 | 1.00[CHB][hapmap] |
| rs12364713 | 1.00[CHB][hapmap] |
| rs1867812 | 1.00[CHB][hapmap] |
| rs55740932 | 0.85[EUR][1000 genomes];0.82[ASN][1000 genomes] |
| rs7102605 | 1.00[CHB][hapmap] |
| rs7108379 | 1.00[CHB][hapmap] |
| rs7122354 | 0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7123170 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7127840 | 1.00[CHB][hapmap] |
| rs726008 | 1.00[CHB][hapmap] |
| rs7929546 | 1.00[CHB][hapmap] |
| rs7939568 | 0.82[ASW][hapmap] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:8397600-8408200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 2 | chr11:8398000-8408000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 3 | chr11:8402600-8403600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
