Variant report

No.	Distal block	Cell Line	Cell type
1	chr3:133421568..133424193-chr3:133424935..133427012,2	MCF-7	breast:
2	chr3:133419477..133421413-chr3:133424514..133426592,2	K562	blood:
3	chr3:133424848..133426463-chr3:133449782..133451405,2	K562	blood:
4	chr3:133413971..133416427-chr3:133424742..133426583,2	K562	blood:
5	chr3:133421589..133423726-chr3:133425033..133427730,2	K562	blood:
6	chr3:133381600..133383745-chr3:133425262..133426763,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs13071381	0.83[ASN][1000 genomes]
rs13318046	1.00[AMR][1000 genomes]
rs2099985	0.86[ASN][1000 genomes]
rs34239013	1.00[AMR][1000 genomes]
rs34672862	0.86[ASN][1000 genomes]
rs35717736	1.00[AMR][1000 genomes]
rs35853116	1.00[ASN][1000 genomes]
rs6774104	0.83[ASN][1000 genomes]
rs6798570	0.83[ASN][1000 genomes]
rs71331727	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7628914	0.83[ASN][1000 genomes]
rs9289452	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9289453	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9809614	0.83[ASN][1000 genomes]
rs9815273	1.00[AFR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9818377	0.86[ASN][1000 genomes]
rs9827019	0.83[ASN][1000 genomes]
rs9839156	0.89[ASN][1000 genomes]
rs9847690	0.86[ASN][1000 genomes]
rs9852403	0.86[ASN][1000 genomes]
rs9852789	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9865536	0.83[ASN][1000 genomes]
rs9876463	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv877506	chr3:133423473-133569777	Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:133411800-133430800	Weak transcription	Brain Angular Gyrus	brain
2	chr3:133412200-133437600	Weak transcription	Stomach Smooth Muscle	stomach
3	chr3:133418800-133437600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr3:133425000-133428200	Weak transcription	Spleen	Spleen
5	chr3:133425600-133425800	Bivalent Enhancer	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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