Variant report

Variant	rs9839156
Chromosome Location	chr3:133399880-133399881
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs13315841	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13325440	0.84[ASN][1000 genomes]
rs1348574	0.86[ASN][1000 genomes]
rs16840601	0.84[ASN][1000 genomes]
rs2099985	0.96[ASN][1000 genomes]
rs34239013	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs34375330	0.84[ASN][1000 genomes]
rs34519945	0.84[ASN][1000 genomes]
rs34664124	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs34672862	0.96[ASN][1000 genomes]
rs34736000	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35717736	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35853116	0.89[ASN][1000 genomes]
rs36033747	0.84[ASN][1000 genomes]
rs6774104	0.93[ASN][1000 genomes]
rs6779063	0.86[ASN][1000 genomes]
rs6798570	0.93[ASN][1000 genomes]
rs71317417	0.86[ASN][1000 genomes]
rs71331727	0.89[ASN][1000 genomes]
rs71331728	0.89[ASN][1000 genomes]
rs7628914	0.93[ASN][1000 genomes]
rs9289452	0.89[ASN][1000 genomes]
rs9289453	0.89[ASN][1000 genomes]
rs9810823	0.86[ASN][1000 genomes]
rs9815273	0.89[ASN][1000 genomes]
rs9818377	0.96[ASN][1000 genomes]
rs9818392	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9827019	0.93[ASN][1000 genomes]
rs9836356	0.86[ASN][1000 genomes]
rs9847690	0.96[ASN][1000 genomes]
rs9852403	0.96[ASN][1000 genomes]
rs9852789	0.89[ASN][1000 genomes]
rs9863830	0.84[ASN][1000 genomes]
rs9865536	0.93[ASN][1000 genomes]
rs9871504	0.86[ASN][1000 genomes]
rs9876463	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9881110	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv516081	chr3:133399702-133412094	Weak transcription Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:133393800-133406800	Weak transcription	Brain Substantia Nigra	brain

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