Variant report

Variant	rs7142149
Chromosome Location	chr14:32135873-32135874
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 313 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:306)

rs_ID	r²[population]
rs10129541	0.80[ASN][1000 genomes]
rs10134906	0.82[ASN][1000 genomes]
rs10135539	0.86[ASN][1000 genomes]
rs10135589	0.84[ASN][1000 genomes]
rs10139871	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10141659	0.80[ASN][1000 genomes]
rs10143899	0.83[ASN][1000 genomes]
rs10144137	0.83[ASN][1000 genomes]
rs10146080	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11156690	0.87[ASN][1000 genomes]
rs11156691	0.87[ASN][1000 genomes]
rs11156692	0.87[ASN][1000 genomes]
rs11156693	0.87[ASN][1000 genomes]
rs11156694	0.86[ASN][1000 genomes]
rs11156695	0.86[ASN][1000 genomes]
rs11156698	0.81[ASN][1000 genomes]
rs11156702	0.82[ASN][1000 genomes]
rs11156703	0.80[ASN][1000 genomes]
rs11620846	0.80[ASN][1000 genomes]
rs11620949	0.86[ASN][1000 genomes]
rs11621036	0.86[ASN][1000 genomes]
rs11621147	0.81[ASN][1000 genomes]
rs11621253	0.82[ASN][1000 genomes]
rs11621384	0.80[ASN][1000 genomes]
rs11621446	0.80[ASN][1000 genomes]
rs11622262	0.87[ASN][1000 genomes]
rs11625161	0.87[ASN][1000 genomes]
rs11625312	0.84[ASN][1000 genomes]
rs11626320	0.87[ASN][1000 genomes]
rs11626466	0.80[ASN][1000 genomes]
rs11626492	0.80[ASN][1000 genomes]
rs11627332	0.84[ASN][1000 genomes]
rs11628555	0.86[ASN][1000 genomes]
rs11628570	0.80[ASN][1000 genomes]
rs11628819	0.86[ASN][1000 genomes]
rs12184972	0.89[ASN][1000 genomes]
rs12431637	0.80[ASN][1000 genomes]
rs12431783	0.80[ASN][1000 genomes]
rs12432120	0.80[ASN][1000 genomes]
rs12432746	0.84[ASN][1000 genomes]
rs12433808	0.82[ASN][1000 genomes]
rs12434789	0.87[ASN][1000 genomes]
rs12435348	0.80[ASN][1000 genomes]
rs12436187	0.80[ASN][1000 genomes]
rs12436940	0.80[ASN][1000 genomes]
rs12437209	0.86[ASN][1000 genomes]
rs12587670	0.88[ASN][1000 genomes]
rs12588396	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12589170	0.92[ASN][1000 genomes]
rs12589227	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12590215	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12590375	0.83[EUR][1000 genomes]
rs12590381	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12590836	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12878022	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12878072	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12878501	0.82[ASN][1000 genomes]
rs12878829	0.80[ASN][1000 genomes]
rs12881020	0.86[ASN][1000 genomes]
rs12881178	0.88[ASN][1000 genomes]
rs12881327	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12881355	0.80[ASN][1000 genomes]
rs12881465	0.84[ASN][1000 genomes]
rs12882018	0.84[ASN][1000 genomes]
rs12882060	0.80[ASN][1000 genomes]
rs12882812	0.88[ASN][1000 genomes]
rs12885598	0.84[ASN][1000 genomes]
rs12886052	0.86[ASN][1000 genomes]
rs12886260	0.80[ASN][1000 genomes]
rs12886367	0.80[ASN][1000 genomes]
rs12887952	0.82[ASN][1000 genomes]
rs12888673	0.89[ASN][1000 genomes]
rs12890184	0.86[ASN][1000 genomes]
rs12890288	0.86[ASN][1000 genomes]
rs12890318	0.81[ASN][1000 genomes]
rs12892973	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12894301	0.82[ASN][1000 genomes]
rs12894811	0.86[ASN][1000 genomes]
rs12895305	0.89[ASN][1000 genomes]
rs12895480	0.82[ASN][1000 genomes]
rs12895565	0.81[ASN][1000 genomes]
rs12896685	0.80[ASN][1000 genomes]
rs1348352	0.89[ASN][1000 genomes]
rs1367315	0.80[ASN][1000 genomes]
rs1373012	0.85[ASN][1000 genomes]
rs1443143	0.88[ASN][1000 genomes]
rs1443144	0.88[ASN][1000 genomes]
rs1470285	0.82[ASN][1000 genomes]
rs1545275	0.89[ASN][1000 genomes]
rs1545276	0.89[ASN][1000 genomes]
rs1548057	0.84[ASN][1000 genomes]
rs1560426	0.82[ASN][1000 genomes]
rs17098014	0.87[ASN][1000 genomes]
rs17098028	0.86[ASN][1000 genomes]
rs17098029	0.86[ASN][1000 genomes]
rs17098061	0.84[ASN][1000 genomes]
rs17098129	0.80[ASN][1000 genomes]
rs17098152	0.80[ASN][1000 genomes]
rs17390315	0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17390625	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17390827	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17481352	0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1816815	0.89[ASN][1000 genomes]
rs1822355	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1947004	0.86[ASN][1000 genomes]
rs1954440	0.89[ASN][1000 genomes]
rs1954441	0.90[ASN][1000 genomes]
rs1972925	0.84[ASN][1000 genomes]
rs2115950	0.83[ASN][1000 genomes]
rs2115951	0.82[ASN][1000 genomes]
rs2120140	0.87[ASN][1000 genomes]
rs2120141	0.87[ASN][1000 genomes]
rs2120142	0.87[ASN][1000 genomes]
rs2153560	0.85[ASN][1000 genomes]
rs2165814	0.86[ASN][1000 genomes]
rs2185522	0.81[ASN][1000 genomes]
rs2211251	0.82[ASN][1000 genomes]
rs2378896	0.88[ASN][1000 genomes]
rs2378897	0.87[ASN][1000 genomes]
rs2378936	0.90[ASN][1000 genomes]
rs2378940	0.82[ASN][1000 genomes]
rs2378942	0.80[ASN][1000 genomes]
rs2378943	0.80[ASN][1000 genomes]
rs2378944	0.80[ASN][1000 genomes]
rs2890037	0.88[ASN][1000 genomes]
rs34042472	0.87[ASN][1000 genomes]
rs34170106	0.80[ASN][1000 genomes]
rs34319089	0.92[ASN][1000 genomes]
rs34327830	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs34394545	0.80[ASN][1000 genomes]
rs34464469	0.91[ASN][1000 genomes]
rs34505839	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs34747628	0.92[ASN][1000 genomes]
rs34782106	0.88[ASN][1000 genomes]
rs34793909	0.80[ASN][1000 genomes]
rs34827813	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34859886	0.82[ASN][1000 genomes]
rs34872357	0.85[ASN][1000 genomes]
rs34950447	0.91[ASN][1000 genomes]
rs34971643	0.89[ASN][1000 genomes]
rs34977423	0.91[ASN][1000 genomes]
rs34984098	0.86[ASN][1000 genomes]
rs35018996	0.80[ASN][1000 genomes]
rs35115571	0.91[EUR][1000 genomes]
rs35117360	0.87[ASN][1000 genomes]
rs35138073	0.86[ASN][1000 genomes]
rs35144494	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs35157202	0.81[ASN][1000 genomes]
rs35272921	0.80[ASN][1000 genomes]
rs35316258	0.87[ASN][1000 genomes]
rs35317729	0.82[ASN][1000 genomes]
rs35334661	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35349298	0.82[ASN][1000 genomes]
rs35396606	0.80[ASN][1000 genomes]
rs35427690	0.82[ASN][1000 genomes]
rs35632753	0.85[ASN][1000 genomes]
rs35655077	0.80[ASN][1000 genomes]
rs35712231	0.87[EUR][1000 genomes]
rs35731734	0.80[ASN][1000 genomes]
rs35765178	0.80[ASN][1000 genomes]
rs35827419	0.82[ASN][1000 genomes]
rs35896456	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35942871	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs36024565	0.86[ASN][1000 genomes]
rs36092827	0.85[ASN][1000 genomes]
rs36161359	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs36168543	0.86[ASN][1000 genomes]
rs3759779	0.86[ASN][1000 genomes]
rs3861472	0.89[ASN][1000 genomes]
rs4011635	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4143988	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4497586	0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4548772	0.80[ASN][1000 genomes]
rs4600374	0.80[ASN][1000 genomes]
rs4619303	0.80[ASN][1000 genomes]
rs4981105	0.87[ASN][1000 genomes]
rs4981106	0.84[ASN][1000 genomes]
rs4981109	0.91[ASN][1000 genomes]
rs4981111	0.88[ASN][1000 genomes]
rs4981112	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4981113	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4981114	0.82[ASN][1000 genomes]
rs4981116	0.82[ASN][1000 genomes]
rs4981117	0.80[ASN][1000 genomes]
rs4981119	0.80[ASN][1000 genomes]
rs4981120	0.82[ASN][1000 genomes]
rs4981121	0.80[ASN][1000 genomes]
rs4981122	0.80[ASN][1000 genomes]
rs4981123	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4981857	0.86[ASN][1000 genomes]
rs4981858	0.86[ASN][1000 genomes]
rs4981860	0.87[ASN][1000 genomes]
rs4981863	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4981864	0.85[ASN][1000 genomes]
rs4981865	0.86[ASN][1000 genomes]
rs4981866	0.84[ASN][1000 genomes]
rs4981868	0.85[ASN][1000 genomes]
rs4981869	0.81[ASN][1000 genomes]
rs4981871	0.92[ASN][1000 genomes]
rs4981874	0.90[ASN][1000 genomes]
rs4981876	0.88[ASN][1000 genomes]
rs4981877	0.92[ASN][1000 genomes]
rs4981880	0.88[ASN][1000 genomes]
rs4981881	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4981887	0.80[ASN][1000 genomes]
rs4981891	0.80[ASN][1000 genomes]
rs4981894	0.80[ASN][1000 genomes]
rs4981895	0.80[ASN][1000 genomes]
rs4981897	0.82[ASN][1000 genomes]
rs4981898	0.80[ASN][1000 genomes]
rs4981899	0.80[ASN][1000 genomes]
rs4981900	0.80[ASN][1000 genomes]
rs4981904	0.80[ASN][1000 genomes]
rs4981905	0.82[ASN][1000 genomes]
rs4981906	0.80[ASN][1000 genomes]
rs4993622	0.82[ASN][1000 genomes]
rs55650244	0.80[ASN][1000 genomes]
rs55701649	0.86[ASN][1000 genomes]
rs55814060	0.90[ASN][1000 genomes]
rs55966138	0.86[ASN][1000 genomes]
rs56091700	0.80[ASN][1000 genomes]
rs58110472	0.87[ASN][1000 genomes]
rs59781248	0.87[ASN][1000 genomes]
rs60782727	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs61997404	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6571434	0.80[ASN][1000 genomes]
rs6571435	0.84[ASN][1000 genomes]
rs6571437	0.84[ASN][1000 genomes]
rs6571438	0.85[ASN][1000 genomes]
rs6571448	0.92[ASN][1000 genomes]
rs6571459	0.80[ASN][1000 genomes]
rs66665255	0.86[ASN][1000 genomes]
rs66753375	0.88[ASN][1000 genomes]
rs67399055	0.80[ASN][1000 genomes]
rs67468105	0.87[ASN][1000 genomes]
rs67753865	0.86[ASN][1000 genomes]
rs71417966	0.83[ASN][1000 genomes]
rs71417969	0.84[ASN][1000 genomes]
rs7142098	0.86[ASN][1000 genomes]
rs71427207	0.84[ASN][1000 genomes]
rs7142801	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7142881	0.84[ASN][1000 genomes]
rs7143323	0.82[ASN][1000 genomes]
rs7143829	0.88[ASN][1000 genomes]
rs7144102	0.86[ASN][1000 genomes]
rs7147510	0.90[ASN][1000 genomes]
rs7148166	0.82[ASN][1000 genomes]
rs7149572	0.87[ASN][1000 genomes]
rs7150402	0.80[ASN][1000 genomes]
rs7152067	0.84[ASN][1000 genomes]
rs7152244	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7152506	0.84[ASN][1000 genomes]
rs7153475	0.80[ASN][1000 genomes]
rs7154174	0.87[ASN][1000 genomes]
rs7154830	0.83[ASN][1000 genomes]
rs7155549	0.86[ASN][1000 genomes]
rs7156670	0.82[ASN][1000 genomes]
rs7156969	0.82[ASN][1000 genomes]
rs7157366	0.82[ASN][1000 genomes]
rs7158021	0.82[ASN][1000 genomes]
rs7158027	0.82[ASN][1000 genomes]
rs720954	0.80[ASN][1000 genomes]
rs72674891	0.80[ASN][1000 genomes]
rs7492643	0.82[ASN][1000 genomes]
rs7493492	0.80[ASN][1000 genomes]
rs7493577	0.80[ASN][1000 genomes]
rs7494358	0.80[ASN][1000 genomes]
rs767333	0.80[ASN][1000 genomes]
rs8003788	0.86[ASN][1000 genomes]
rs8005303	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs8006164	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs8007984	0.80[ASN][1000 genomes]
rs8009126	0.87[ASN][1000 genomes]
rs8009531	0.87[ASN][1000 genomes]
rs8009547	0.91[ASN][1000 genomes]
rs8009557	0.86[ASN][1000 genomes]
rs8009647	0.86[ASN][1000 genomes]
rs8010049	0.87[ASN][1000 genomes]
rs8010500	0.85[ASN][1000 genomes]
rs8010580	0.82[ASN][1000 genomes]
rs8011663	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs8013530	0.91[ASN][1000 genomes]
rs8013916	0.87[ASN][1000 genomes]
rs8014386	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs8015282	0.88[ASN][1000 genomes]
rs8015944	0.87[ASN][1000 genomes]
rs8016490	0.86[ASN][1000 genomes]
rs8016832	0.86[ASN][1000 genomes]
rs8016912	0.82[ASN][1000 genomes]
rs8018042	0.87[ASN][1000 genomes]
rs8018186	0.80[ASN][1000 genomes]
rs8019075	0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8019333	0.80[ASN][1000 genomes]
rs8019820	0.80[ASN][1000 genomes]
rs8020055	0.80[ASN][1000 genomes]
rs8020397	0.80[ASN][1000 genomes]
rs8020748	0.92[ASN][1000 genomes]
rs8021092	0.80[ASN][1000 genomes]
rs8021851	0.84[ASN][1000 genomes]
rs8022163	0.84[ASN][1000 genomes]
rs8022541	0.80[ASN][1000 genomes]
rs8022828	0.87[ASN][1000 genomes]
rs919521	0.80[ASN][1000 genomes]
rs920729	0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9635155	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9635156	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv934206	chr14:31887749-32257097	ZNF genes & repeats Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
2	nsv564180	chr14:31958566-32368934	Strong transcription Enhancers Transcr. at gene 5' and 3' Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
3	nsv564181	chr14:31958761-32363980	Weak transcription Flanking Active TSS ZNF genes & repeats Enhancers Active TSS Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
4	nsv901591	chr14:32093548-32202677	Weak transcription ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
5	nsv901592	chr14:32093548-32267323	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
6	nsv564182	chr14:32110519-32584337	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
7	nsv1046526	chr14:32110537-32567426	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32117000-32148200	Weak transcription	Pancreas	Pancrea
2	chr14:32135200-32147000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
3	chr14:32135400-32147000	Weak transcription	HepG2	liver
4	chr14:32135800-32170800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood

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