The 2.0 version of rSNPBase

Variant report

Variant rs12892973
Chromosome Location chr14:32173324-32173325
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:32141400-32175800 Weak transcription Primary T helper cells fromperipheralblood blood
2 chr14:32148000-32183600 Weak transcription Stomach Smooth Muscle stomach
3 chr14:32159000-32184800 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr14:32162000-32175000 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr14:32162000-32186800 Weak transcription Brain Hippocampus Middle brain
6 chr14:32165000-32179600 Weak transcription Brain Inferior Temporal Lobe brain
7 chr14:32165600-32188200 Weak transcription Right Ventricle heart
8 chr14:32165800-32175000 Weak transcription Gastric stomach
9 chr14:32166400-32177800 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr14:32166600-32176200 Weak transcription Liver Liver
11 chr14:32167200-32177000 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr14:32167800-32174400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr14:32168800-32174400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr14:32168800-32176800 Weak transcription Left Ventricle heart
15 chr14:32169600-32177200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr14:32169600-32181800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr14:32169800-32173800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr14:32170400-32175400 Weak transcription Fetal Lung lung
19 chr14:32170800-32173600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr14:32171000-32186400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr14:32171000-32200600 Weak transcription Placenta Amnion Placenta Amnion
22 chr14:32171400-32175200 Strong transcription Primary T cells from cord blood blood
23 chr14:32171600-32173400 Strong transcription Primary B cells from cord blood blood
24 chr14:32171600-32173400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
25 chr14:32171600-32174000 Weak transcription HepG2 liver
26 chr14:32171600-32174800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr14:32171600-32176400 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr14:32171800-32173800 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr14:32171800-32175000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr14:32171800-32176000 Weak transcription Primary T cells fromperipheralblood blood
31 chr14:32171800-32176800 Weak transcription A549 lung
32 chr14:32171800-32182200 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr14:32172000-32174600 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr14:32172000-32186400 Weak transcription Pancreas Pancrea
35 chr14:32172000-32188200 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr14:32172200-32173800 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr14:32172200-32174800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr14:32172200-32180000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr14:32172400-32173400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr14:32172400-32174800 Strong transcription Fetal Stomach stomach
41 chr14:32172400-32175200 Strong transcription Adipose Nuclei Adipose
42 chr14:32172400-32175400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr14:32172400-32175400 ZNF genes & repeats Dnd41 blood
44 chr14:32172400-32175600 ZNF genes & repeats Fetal Intestine Small intestine
45 chr14:32172600-32173400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr14:32172600-32173400 ZNF genes & repeats Esophagus oesophagus
47 chr14:32172600-32173600 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
48 chr14:32172600-32174200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr14:32172600-32174400 Strong transcription Fetal Adrenal Gland Adrenal Gland
50 chr14:32172600-32174400 Weak transcription Fetal Brain Female brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015