Variant report

Variant	rs7144586
Chromosome Location	chr14:32713292-32713293
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs1007279	1.00[CEU][hapmap];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs10145223	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17388327	0.83[CEU][hapmap];0.87[MEX][hapmap]
rs1951680	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs35312946	0.81[AMR][1000 genomes]
rs4981953	1.00[CEU][hapmap];1.00[GIH][hapmap];0.81[MEX][hapmap];0.83[TSI][hapmap];0.93[EUR][1000 genomes]
rs4981956	0.86[CEU][hapmap];0.83[EUR][1000 genomes]
rs61981814	0.81[AMR][1000 genomes]
rs7155347	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7160483	1.00[CEU][hapmap];0.89[YRI][hapmap];0.97[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7161530	0.95[CEU][hapmap];0.86[EUR][1000 genomes]
rs7161546	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs8011923	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs8012126	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs8014494	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9972142	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832764	chr14:32564468-32723213	Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	esv3527777	chr14:32669175-32761850	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	esv3527778	chr14:32669175-32761850	Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
4	nsv564184	chr14:32688214-32734691	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32701200-32713600	Weak transcription	Left Ventricle	heart
2	chr14:32712400-32713400	Weak transcription	Fetal Heart	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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