Variant report

Variant	rs7155347
Chromosome Location	chr14:32697558-32697559
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1007279	1.00[CEU][hapmap];0.80[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10145223	0.91[EUR][1000 genomes]
rs17388327	0.83[CEU][hapmap];0.81[TSI][hapmap]
rs1951680	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs34186445	0.81[EUR][1000 genomes]
rs35312946	0.83[EUR][1000 genomes]
rs4981953	1.00[CEU][hapmap];0.91[GIH][hapmap];0.85[TSI][hapmap];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4981956	0.86[CEU][hapmap];0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs61981813	0.83[EUR][1000 genomes]
rs61981814	0.83[EUR][1000 genomes]
rs7144586	1.00[CEU][hapmap];0.91[GIH][hapmap];0.88[TSI][hapmap];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7160483	1.00[CEU][hapmap];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7161530	0.91[CEU][hapmap];0.84[EUR][1000 genomes]
rs7161546	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72664699	0.83[EUR][1000 genomes]
rs8011923	0.91[EUR][1000 genomes]
rs8012126	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs8014494	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs9972142	0.87[EUR][1000 genomes]
rs9972143	0.84[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832764	chr14:32564468-32723213	Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	esv3527777	chr14:32669175-32761850	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	esv3527778	chr14:32669175-32761850	Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
4	nsv564184	chr14:32688214-32734691	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32691400-32699800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr14:32694400-32699000	Weak transcription	Aorta	Aorta
3	chr14:32694600-32700000	Weak transcription	Pancreas	Pancrea
4	chr14:32694800-32700000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr14:32695000-32698600	Weak transcription	A549	lung
6	chr14:32695000-32698800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr14:32695000-32698800	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr14:32695000-32698800	Weak transcription	NH-A	brain
9	chr14:32695000-32699400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr14:32695000-32699400	Weak transcription	Stomach Smooth Muscle	stomach
11	chr14:32695200-32698400	Weak transcription	Hela-S3	cervix
12	chr14:32695400-32698400	Weak transcription	NHEK	skin
13	chr14:32695400-32698800	Weak transcription	Pancreatic Islets	Pancreatic Islet
14	chr14:32695600-32698400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr14:32695600-32698600	Weak transcription	NHDF-Ad	bronchial
16	chr14:32695600-32698800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr14:32695600-32699000	Weak transcription	Colon Smooth Muscle	Colon
18	chr14:32695600-32699200	Weak transcription	Rectal Smooth Muscle	rectum
19	chr14:32695800-32698600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr14:32695800-32698600	Weak transcription	HMEC	breast
21	chr14:32695800-32699000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr14:32695800-32699000	Weak transcription	Right Atrium	heart
23	chr14:32695800-32699000	Weak transcription	Skeletal Muscle Female	skeletal muscle
24	chr14:32695800-32699200	Weak transcription	Skeletal Muscle Male	skeletal muscle
25	chr14:32695800-32701800	Weak transcription	Small Intestine	intestine
26	chr14:32696000-32698400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
27	chr14:32696000-32698800	Weak transcription	Fetal Heart	heart
28	chr14:32696000-32699800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
29	chr14:32696000-32700000	Weak transcription	Right Ventricle	heart
30	chr14:32696600-32698600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
31	chr14:32696600-32699600	Weak transcription	Placenta Amnion	Placenta Amnion
32	chr14:32696600-32699800	Weak transcription	Left Ventricle	heart
33	chr14:32697000-32697600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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