The 2.0 version of rSNPBase

Variant report

Variant rs71576809
Chromosome Location chr5:124469977-124469978
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:18 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:124456200-124470000 Weak transcription H9 Cell Line embryonic stem cell
2 chr5:124456200-124470200 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr5:124465400-124470000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr5:124465400-124471000 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr5:124465600-124470000 Weak transcription HUVEC blood vessel
6 chr5:124465600-124470000 Weak transcription NHDF-Ad bronchial
7 chr5:124468200-124472000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
8 chr5:124468800-124470000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr5:124468800-124470000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr5:124469400-124472400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
11 chr5:124469800-124470600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr5:124469800-124471000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr5:124469800-124471000 Enhancers Osteobl bone
14 chr5:124469800-124471400 Enhancers ES-I3 Cell Line embryonic stem cell
15 chr5:124469800-124471400 Enhancers iPS-15b Cell Line embryonic stem cell
16 chr5:124469800-124471400 Enhancers iPS-18 Cell Line embryonic stem cell
17 chr5:124469800-124471400 Enhancers Muscle Satellite Cultured Cells --
18 chr5:124469800-124471400 Enhancers HSMMtube muscle

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Last update: Aug 31, 2015