Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11858064	1.00[CEU][hapmap];0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16946552	0.99[ASN][1000 genomes]
rs16946577	1.00[ASN][1000 genomes]
rs17645517	0.83[ASN][1000 genomes]
rs4635293	1.00[ASN][1000 genomes]
rs60040055	1.00[EUR][1000 genomes]
rs61128186	0.83[ASN][1000 genomes]
rs61319661	0.99[ASN][1000 genomes]
rs7162179	1.00[EUR][1000 genomes]
rs7165788	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7168143	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs7172911	1.00[CEU][hapmap];0.85[CHB][hapmap];0.81[CHD][hapmap];0.90[GIH][hapmap];0.88[MEX][hapmap];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7179984	0.99[ASN][1000 genomes]
rs7181306	0.83[ASN][1000 genomes]
rs7182998	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs7183769	1.00[EUR][1000 genomes]
rs73546333	1.00[EUR][1000 genomes]
rs73546334	1.00[EUR][1000 genomes]
rs73546337	1.00[EUR][1000 genomes]
rs73546340	1.00[EUR][1000 genomes]
rs73546342	1.00[EUR][1000 genomes]
rs73546366	1.00[EUR][1000 genomes]
rs8036116	0.81[ASN][1000 genomes]
rs8037526	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948621	chr15:92688981-93158095	Enhancers Bivalent/Poised TSS ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
2	nsv1049561	chr15:92758434-93097965	Enhancers Weak transcription Bivalent/Poised TSS Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:92773800-92775200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr15:92774400-92776800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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