The 2.0 version of rSNPBase

Variant report

Variant rs724387
Chromosome Location chr2:53899844-53899845
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:53874200-53935000 Weak transcription Pancreas Pancrea
2 chr2:53881400-53934400 Weak transcription Stomach Smooth Muscle stomach
3 chr2:53885600-53925000 Weak transcription Fetal Intestine Small intestine
4 chr2:53885800-53911800 Weak transcription Adipose Nuclei Adipose
5 chr2:53888200-53934200 Weak transcription Lung lung
6 chr2:53888400-53935200 Weak transcription Fetal Brain Male brain
7 chr2:53888600-53935200 Weak transcription Hela-S3 cervix
8 chr2:53889000-53935800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr2:53891600-53900000 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr2:53892600-53902600 Weak transcription Rectal Smooth Muscle rectum
11 chr2:53892600-53918800 Weak transcription Left Ventricle heart
12 chr2:53893400-53915200 Weak transcription Ovary ovary
13 chr2:53893800-53926800 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr2:53894200-53920800 Weak transcription Duodenum Mucosa Duodenum
15 chr2:53894400-53900400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr2:53894400-53912200 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr2:53894400-53914400 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr2:53894400-53925000 Weak transcription Fetal Muscle Trunk muscle
19 chr2:53894400-53933800 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr2:53894600-53900000 Weak transcription Stomach Mucosa stomach
21 chr2:53894600-53911200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr2:53894800-53900000 Weak transcription Brain Hippocampus Middle brain
23 chr2:53895000-53900200 Weak transcription Brain Substantia Nigra brain
24 chr2:53895000-53911800 Weak transcription Primary T cells fromperipheralblood blood
25 chr2:53895400-53919000 Weak transcription Fetal Intestine Large intestine
26 chr2:53895400-53921200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr2:53895400-53925800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr2:53895400-53926200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr2:53895600-53914800 Weak transcription Primary monocytes fromperipheralblood blood
30 chr2:53895600-53921400 Weak transcription Brain Inferior Temporal Lobe brain
31 chr2:53895800-53916800 Weak transcription Brain Anterior Caudate brain
32 chr2:53895800-53926200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr2:53896000-53900000 Weak transcription HSMM muscle
34 chr2:53896000-53913000 Weak transcription Fetal Muscle Leg muscle
35 chr2:53896000-53918800 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr2:53896200-53911200 Weak transcription Liver Liver
37 chr2:53896200-53918400 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr2:53896400-53926000 Weak transcription HUES48 Cell Line embryonic stem cell
39 chr2:53896600-53900000 Weak transcription Fetal Heart heart
40 chr2:53896800-53900200 Weak transcription NH-A brain
41 chr2:53896800-53910200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr2:53896800-53910800 Weak transcription Primary B cells from peripheral blood blood
43 chr2:53896800-53918800 Weak transcription Fetal Brain Female brain
44 chr2:53896800-53924800 Weak transcription Thymus Thymus
45 chr2:53896800-53936600 Weak transcription Aorta Aorta
46 chr2:53897000-53910400 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr2:53897000-53911400 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr2:53897400-53900200 Weak transcription K562 blood
49 chr2:53897400-53910200 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr2:53897400-53910200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015