The 2.0 version of rSNPBase

Variant report

Variant rs2177792
Chromosome Location chr2:54059913-54059914
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54025800-54062000 Weak transcription Right Ventricle heart
2 chr2:54025800-54085600 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr2:54030400-54063000 Weak transcription Esophagus oesophagus
4 chr2:54042800-54062200 Weak transcription Fetal Kidney kidney
5 chr2:54046600-54080200 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr2:54046600-54080200 Weak transcription NHDF-Ad bronchial
7 chr2:54046800-54060400 Weak transcription Primary B cells from cord blood blood
8 chr2:54046800-54070800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr2:54046800-54080400 Weak transcription Rectal Smooth Muscle rectum
10 chr2:54047000-54060600 Weak transcription Primary T cells fromperipheralblood blood
11 chr2:54047000-54061400 Weak transcription Fetal Thymus thymus
12 chr2:54047000-54080200 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr2:54047000-54080200 Weak transcription A549 lung
14 chr2:54047000-54080400 Weak transcription Gastric stomach
15 chr2:54047000-54080400 Weak transcription Pancreas Pancrea
16 chr2:54047000-54080800 Weak transcription Aorta Aorta
17 chr2:54047200-54061800 Weak transcription Thymus Thymus
18 chr2:54047200-54063000 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr2:54047200-54067600 Weak transcription HSMM muscle
20 chr2:54047200-54070800 Weak transcription Placenta Placenta
21 chr2:54047200-54077000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr2:54047200-54080000 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr2:54047200-54080200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
24 chr2:54047200-54080200 Weak transcription Muscle Satellite Cultured Cells --
25 chr2:54047200-54080200 Weak transcription Fetal Muscle Trunk muscle
26 chr2:54047200-54080400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr2:54047200-54080400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr2:54047200-54080800 Weak transcription Primary B cells from peripheral blood blood
29 chr2:54047600-54080400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr2:54047600-54080800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr2:54047800-54064200 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr2:54048200-54065000 Weak transcription Stomach Smooth Muscle stomach
33 chr2:54050200-54080400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr2:54050400-54080200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr2:54050600-54080200 Weak transcription Fetal Stomach stomach
36 chr2:54051000-54080000 Weak transcription Osteobl bone
37 chr2:54054000-54066400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr2:54054000-54080400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
39 chr2:54054400-54063000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr2:54054400-54080400 Weak transcription NHLF lung
41 chr2:54054800-54068400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr2:54055000-54062000 Weak transcription Fetal Intestine Large intestine
43 chr2:54055000-54075000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr2:54055200-54063200 Weak transcription Lung lung
45 chr2:54055200-54075000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr2:54055200-54080400 Weak transcription Ovary ovary
47 chr2:54055200-54081000 Weak transcription Psoas Muscle Psoas
48 chr2:54055400-54060200 Weak transcription Fetal Lung lung
49 chr2:54055400-54061000 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr2:54055400-54069200 Weak transcription Fetal Brain Male brain

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Last update: Aug 31, 2015