The 2.0 version of rSNPBase

Variant report

Variant rs7608989
Chromosome Location chr2:54061637-54061638
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54025800-54062000 Weak transcription Right Ventricle heart
2 chr2:54025800-54085600 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr2:54030400-54063000 Weak transcription Esophagus oesophagus
4 chr2:54042800-54062200 Weak transcription Fetal Kidney kidney
5 chr2:54046600-54080200 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr2:54046600-54080200 Weak transcription NHDF-Ad bronchial
7 chr2:54046800-54070800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr2:54046800-54080400 Weak transcription Rectal Smooth Muscle rectum
9 chr2:54047000-54080200 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr2:54047000-54080200 Weak transcription A549 lung
11 chr2:54047000-54080400 Weak transcription Gastric stomach
12 chr2:54047000-54080400 Weak transcription Pancreas Pancrea
13 chr2:54047000-54080800 Weak transcription Aorta Aorta
14 chr2:54047200-54061800 Weak transcription Thymus Thymus
15 chr2:54047200-54063000 Weak transcription Primary hematopoietic stem cells short term culture blood
16 chr2:54047200-54067600 Weak transcription HSMM muscle
17 chr2:54047200-54070800 Weak transcription Placenta Placenta
18 chr2:54047200-54077000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr2:54047200-54080000 Weak transcription Primary T helper cells fromperipheralblood blood
20 chr2:54047200-54080200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr2:54047200-54080200 Weak transcription Muscle Satellite Cultured Cells --
22 chr2:54047200-54080200 Weak transcription Fetal Muscle Trunk muscle
23 chr2:54047200-54080400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr2:54047200-54080400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr2:54047200-54080800 Weak transcription Primary B cells from peripheral blood blood
26 chr2:54047600-54080400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr2:54047600-54080800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr2:54047800-54064200 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr2:54048200-54065000 Weak transcription Stomach Smooth Muscle stomach
30 chr2:54050200-54080400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr2:54050400-54080200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr2:54050600-54080200 Weak transcription Fetal Stomach stomach
33 chr2:54051000-54080000 Weak transcription Osteobl bone
34 chr2:54054000-54066400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr2:54054000-54080400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
36 chr2:54054400-54063000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr2:54054400-54080400 Weak transcription NHLF lung
38 chr2:54054800-54068400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr2:54055000-54062000 Weak transcription Fetal Intestine Large intestine
40 chr2:54055000-54075000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr2:54055200-54063200 Weak transcription Lung lung
42 chr2:54055200-54075000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr2:54055200-54080400 Weak transcription Ovary ovary
44 chr2:54055200-54081000 Weak transcription Psoas Muscle Psoas
45 chr2:54055400-54069200 Weak transcription Fetal Brain Male brain
46 chr2:54055400-54076400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr2:54055400-54080000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr2:54056200-54080200 Weak transcription Fetal Muscle Leg muscle
49 chr2:54056400-54066800 Weak transcription Fetal Intestine Small intestine
50 chr2:54056800-54080200 Weak transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015