Variant report

Variant	rs72639143
Chromosome Location	chr11:76726321-76726322
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:76721230..76723722-chr11:76724373..76726588,2	K562	blood:
2	chr11:76725155..76726765-chr11:76732739..76734489,2	MCF-7	breast:

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10899326	0.81[ASN][1000 genomes]
rs10899331	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10899334	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10899339	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11236980	0.92[AFR][1000 genomes]
rs11237048	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11237053	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11237054	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11237056	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12222780	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12224200	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs17135325	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs60495644	0.81[ASN][1000 genomes]
rs7121184	0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72639138	0.81[ASN][1000 genomes]
rs72639139	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72639140	0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72639142	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:79 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76675000-76729600	Weak transcription	Brain Angular Gyrus	brain
2	chr11:76683000-76736400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr11:76683200-76729200	Weak transcription	Brain Hippocampus Middle	brain
4	chr11:76683600-76728000	Weak transcription	Brain Anterior Caudate	brain
5	chr11:76689200-76734600	Weak transcription	Liver	Liver
6	chr11:76689600-76737000	Weak transcription	Pancreas	Pancrea
7	chr11:76689800-76731400	Weak transcription	Ovary	ovary
8	chr11:76690000-76735800	Weak transcription	Rectal Smooth Muscle	rectum
9	chr11:76690200-76729000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr11:76690200-76736800	Weak transcription	Skeletal Muscle Male	skeletal muscle
11	chr11:76690400-76734600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
12	chr11:76693800-76734800	Strong transcription	Monocytes-CD14+_RO01746	blood
13	chr11:76694000-76738600	Weak transcription	HSMMtube	muscle
14	chr11:76696200-76738000	Weak transcription	Skeletal Muscle Female	skeletal muscle
15	chr11:76696400-76726600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr11:76696600-76726800	Weak transcription	Esophagus	oesophagus
17	chr11:76697000-76726600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr11:76698000-76726600	Weak transcription	NHDF-Ad	bronchial
19	chr11:76699800-76731200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
20	chr11:76700000-76729800	Weak transcription	Left Ventricle	heart
21	chr11:76701200-76738400	Weak transcription	Brain Inferior Temporal Lobe	brain
22	chr11:76702600-76736000	Weak transcription	Brain Substantia Nigra	brain
23	chr11:76705600-76735600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
24	chr11:76707200-76730800	Weak transcription	Sigmoid Colon	Sigmoid Colon
25	chr11:76707600-76730400	Weak transcription	Fetal Brain Male	brain
26	chr11:76709600-76732400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
27	chr11:76709600-76733200	Weak transcription	Fetal Lung	lung
28	chr11:76709800-76728000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
29	chr11:76709800-76731200	Weak transcription	HUES48 Cell Line	embryonic stem cell
30	chr11:76711000-76726600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr11:76711200-76734600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
32	chr11:76712200-76733600	Weak transcription	Psoas Muscle	Psoas
33	chr11:76714400-76726600	Weak transcription	Fetal Intestine Large	intestine
34	chr11:76715800-76726400	Weak transcription	Hela-S3	cervix
35	chr11:76716200-76734800	Strong transcription	Primary monocytes fromperipheralblood	blood
36	chr11:76716400-76739800	Weak transcription	Colonic Mucosa	Colon
37	chr11:76717200-76731200	Weak transcription	HSMM	muscle
38	chr11:76718000-76733600	Weak transcription	Right Ventricle	heart
39	chr11:76718200-76731200	Weak transcription	Primary T cells from cord blood	blood
40	chr11:76718600-76726600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
41	chr11:76719200-76730000	Weak transcription	Primary hematopoietic stem cells	blood
42	chr11:76719800-76731800	Weak transcription	Brain Germinal Matrix	brain
43	chr11:76720000-76738000	Weak transcription	Fetal Muscle Leg	muscle
44	chr11:76720400-76731600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
45	chr11:76720400-76735600	Weak transcription	Primary B cells from cord blood	blood
46	chr11:76720400-76738000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
47	chr11:76720600-76726600	Weak transcription	Fetal Intestine Small	intestine
48	chr11:76720600-76730600	Weak transcription	HMEC	breast
49	chr11:76720600-76731400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
50	chr11:76720800-76730800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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