Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10754304	1.00[EUR][1000 genomes]
rs1396319	1.00[EUR][1000 genomes]
rs1508504	0.89[EUR][1000 genomes]
rs1703027	1.00[EUR][1000 genomes]
rs17131012	1.00[EUR][1000 genomes]
rs1988676	1.00[EUR][1000 genomes]
rs2136091	1.00[EUR][1000 genomes]
rs4589092	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs506796	1.00[EUR][1000 genomes]
rs569106	1.00[EUR][1000 genomes]
rs6676374	1.00[EUR][1000 genomes]
rs6687644	0.90[AFR][1000 genomes]
rs699532	1.00[EUR][1000 genomes]
rs699533	1.00[EUR][1000 genomes]
rs699546	1.00[EUR][1000 genomes]
rs72646160	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72646161	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72646162	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs72646167	1.00[EUR][1000 genomes]
rs72646168	1.00[EUR][1000 genomes]
rs7416000	1.00[EUR][1000 genomes]
rs7547180	1.00[EUR][1000 genomes]
rs997077	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv546803	chr1:90679734-90777717	Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:90692000-90706200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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