Variant report

Variant	rs72678151
Chromosome Location	chr4:131030234-131030235
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10518560	0.87[EUR][1000 genomes]
rs28428490	0.87[EUR][1000 genomes]
rs28581332	0.87[EUR][1000 genomes]
rs4864324	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55907609	0.87[EUR][1000 genomes]
rs61464540	1.00[ASN][1000 genomes]
rs66516628	0.87[EUR][1000 genomes]
rs66528219	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66920142	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67137307	0.87[EUR][1000 genomes]
rs67312336	1.00[ASN][1000 genomes]
rs67696760	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67814075	1.00[ASN][1000 genomes]
rs67992570	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs68036106	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs68081878	1.00[ASN][1000 genomes]
rs72678118	0.87[EUR][1000 genomes]
rs72678137	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72678144	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72936630	1.00[ASN][1000 genomes]
rs7670930	0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv595415	chr4:130983605-131046911	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	nsv595416	chr4:130998472-131834405	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	esv2762461	chr4:131004382-131391658	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:131030000-131030400	Enhancers	iPS-20b Cell Line	embryonic stem cell
2	chr4:131030000-131033200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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