Variant report

Variant	rs72694502
Chromosome Location	chr14:85161244-85161245
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs1481417	1.00[ASN][1000 genomes]
rs2623122	1.00[ASN][1000 genomes]
rs2623123	1.00[ASN][1000 genomes]
rs2623145	1.00[ASN][1000 genomes]
rs2765916	1.00[ASN][1000 genomes]
rs2819809	1.00[ASN][1000 genomes]
rs2819810	1.00[ASN][1000 genomes]
rs2819817	1.00[ASN][1000 genomes]
rs2819820	1.00[ASN][1000 genomes]
rs2819825	1.00[ASN][1000 genomes]
rs2922650	1.00[ASN][1000 genomes]
rs2922655	1.00[ASN][1000 genomes]
rs2998292	1.00[ASN][1000 genomes]
rs2998324	1.00[ASN][1000 genomes]
rs3008502	1.00[ASN][1000 genomes]
rs3008503	1.00[ASN][1000 genomes]
rs72692351	1.00[ASN][1000 genomes]
rs8011868	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2751288	chr14:84815330-85704047	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1046875	chr14:84993510-85193250	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	esv1829021	chr14:85106009-85196163	Enhancers Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:85160200-85161800	Enhancers	Colon Smooth Muscle	Colon
2	chr14:85160600-85161600	Enhancers	Fetal Lung	lung
3	chr14:85160600-85161800	Enhancers	Fetal Brain Male	brain
4	chr14:85160600-85161800	Enhancers	Rectal Smooth Muscle	rectum
5	chr14:85161200-85161800	Enhancers	Ovary	ovary

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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