Variant report

Variant	rs72720237
Chromosome Location	chr1:95451173-95451174
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:95402811..95405295-chr1:95450498..95453342,2	K562	blood:

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs57591007	0.90[AMR][1000 genomes]
rs57765682	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs58056748	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs58810066	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60433630	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs61211591	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs61231950	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6593664	0.83[EUR][1000 genomes]
rs72720240	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72720242	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72720244	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72720246	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72720251	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72720252	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72720259	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]

No data

Chromatin state (count:60 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:95429000-95467600	Weak transcription	Stomach Smooth Muscle	stomach
2	chr1:95436600-95451200	Weak transcription	Small Intestine	intestine
3	chr1:95437600-95455600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr1:95437800-95455000	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr1:95437800-95458400	Weak transcription	Liver	Liver
6	chr1:95446800-95455000	Weak transcription	Left Ventricle	heart
7	chr1:95446800-95457800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr1:95447000-95452200	Weak transcription	Fetal Intestine Small	intestine
9	chr1:95447000-95490800	Weak transcription	Fetal Intestine Large	intestine
10	chr1:95447600-95460400	Weak transcription	Rectal Mucosa Donor 31	rectum
11	chr1:95448000-95455000	Weak transcription	Fetal Muscle Trunk	muscle
12	chr1:95448200-95451200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr1:95448200-95491000	Weak transcription	Primary B cells from cord blood	blood
14	chr1:95448400-95452400	Enhancers	HSMMtube	muscle
15	chr1:95448600-95451200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
16	chr1:95448800-95451200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
17	chr1:95448800-95452400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr1:95448800-95455000	Weak transcription	Duodenum Mucosa	Duodenum
19	chr1:95448800-95460000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
20	chr1:95449000-95451800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
21	chr1:95449000-95453600	Weak transcription	Psoas Muscle	Psoas
22	chr1:95449000-95455000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
23	chr1:95449000-95455000	Weak transcription	Brain Hippocampus Middle	brain
24	chr1:95449000-95455000	Weak transcription	Stomach Mucosa	stomach
25	chr1:95449000-95455400	Weak transcription	Brain Angular Gyrus	brain
26	chr1:95449000-95458600	Weak transcription	Right Ventricle	heart
27	chr1:95449000-95460800	Weak transcription	Fetal Kidney	kidney
28	chr1:95449200-95451200	Weak transcription	HepG2	liver
29	chr1:95449200-95451400	Weak transcription	Brain Cingulate Gyrus	brain
30	chr1:95449200-95452400	Weak transcription	Primary T cells from cord blood	blood
31	chr1:95449200-95452400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
32	chr1:95449200-95452400	Weak transcription	HMEC	breast
33	chr1:95449200-95452400	Weak transcription	HSMM	muscle
34	chr1:95449200-95452400	Weak transcription	NH-A	brain
35	chr1:95449200-95452400	Weak transcription	NHLF	lung
36	chr1:95449200-95452600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
37	chr1:95449200-95452600	Weak transcription	Placenta Amnion	Placenta Amnion
38	chr1:95449200-95452800	Weak transcription	Adipose Nuclei	Adipose
39	chr1:95449200-95453800	Weak transcription	Skeletal Muscle Male	skeletal muscle
40	chr1:95449200-95455000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
41	chr1:95449200-95455000	Weak transcription	Fetal Muscle Leg	muscle
42	chr1:95449200-95455000	Weak transcription	Rectal Smooth Muscle	rectum
43	chr1:95449200-95455000	Weak transcription	Right Atrium	heart
44	chr1:95449200-95455400	Weak transcription	Fetal Heart	heart
45	chr1:95449400-95452400	Weak transcription	NHDF-Ad	bronchial
46	chr1:95449400-95452400	Weak transcription	NHEK	skin
47	chr1:95449400-95452400	Weak transcription	Osteobl	bone
48	chr1:95449400-95452600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
49	chr1:95449400-95453600	Weak transcription	HUVEC	blood vessel
50	chr1:95449800-95452400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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