Variant report

Variant	rs72728226
Chromosome Location	chr14:65461995-65461996
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs11628676	1.00[ASN][1000 genomes]
rs55723212	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55836818	1.00[ASN][1000 genomes]
rs56012740	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56328485	1.00[ASN][1000 genomes]
rs56354838	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs56381821	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57581750	1.00[ASN][1000 genomes]
rs59414553	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs61596817	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7159356	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs72728221	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72728225	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72728227	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs72728229	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72728238	1.00[ASN][1000 genomes]

No data

Chromatin state (count:83 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65454400-65472600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr14:65454600-65464000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr14:65454600-65470200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr14:65454600-65470600	Weak transcription	Fetal Muscle Trunk	muscle
5	chr14:65454600-65472200	Weak transcription	Esophagus	oesophagus
6	chr14:65454800-65464000	Weak transcription	Fetal Brain Female	brain
7	chr14:65454800-65464400	Weak transcription	Rectal Mucosa Donor 31	rectum
8	chr14:65454800-65469600	Weak transcription	Brain Angular Gyrus	brain
9	chr14:65454800-65473000	Weak transcription	Fetal Kidney	kidney
10	chr14:65454800-65478200	Weak transcription	Brain Cingulate Gyrus	brain
11	chr14:65454800-65478400	Weak transcription	Brain Anterior Caudate	brain
12	chr14:65454800-65482800	Weak transcription	Rectal Smooth Muscle	rectum
13	chr14:65454800-65513800	Weak transcription	Stomach Mucosa	stomach
14	chr14:65455000-65463600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr14:65455000-65463800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr14:65455000-65464000	Weak transcription	Placenta Amnion	Placenta Amnion
17	chr14:65455000-65465000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
18	chr14:65455000-65465000	Weak transcription	Osteobl	bone
19	chr14:65455000-65470800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr14:65455200-65463800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr14:65455200-65463800	Weak transcription	NHEK	skin
22	chr14:65455200-65464000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr14:65455200-65464400	Weak transcription	NHDF-Ad	bronchial
24	chr14:65455200-65465000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr14:65455200-65469400	Weak transcription	Fetal Lung	lung
26	chr14:65455200-65469400	Weak transcription	K562	blood
27	chr14:65455200-65476000	Weak transcription	Rectal Mucosa Donor 29	rectum
28	chr14:65455200-65479000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr14:65455400-65464000	Weak transcription	Adipose Nuclei	Adipose
30	chr14:65455400-65464000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
31	chr14:65455600-65464800	Weak transcription	A549	lung
32	chr14:65455600-65473000	Weak transcription	Cortex derived primary cultured neurospheres	brain
33	chr14:65455600-65478400	Weak transcription	Brain Germinal Matrix	brain
34	chr14:65456200-65462400	Enhancers	Primary monocytes fromperipheralblood	blood
35	chr14:65457000-65465200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
36	chr14:65457200-65464000	Weak transcription	Right Atrium	heart
37	chr14:65457200-65472200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
38	chr14:65457200-65472400	Weak transcription	Skeletal Muscle Female	skeletal muscle
39	chr14:65457400-65464200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr14:65457400-65471000	Weak transcription	Thymus	Thymus
41	chr14:65457400-65476600	Weak transcription	Brain Inferior Temporal Lobe	brain
42	chr14:65457600-65464000	Weak transcription	Psoas Muscle	Psoas
43	chr14:65457600-65465400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
44	chr14:65457600-65467200	Weak transcription	Left Ventricle	heart
45	chr14:65457600-65470800	Weak transcription	Primary T cells from cord blood	blood
46	chr14:65457600-65478400	Weak transcription	Sigmoid Colon	Sigmoid Colon
47	chr14:65457600-65479200	Weak transcription	Primary B cells from peripheral blood	blood
48	chr14:65457600-65479200	Weak transcription	Right Ventricle	heart
49	chr14:65457600-65499800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
50	chr14:65457800-65472400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

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