Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:130142319..130144172-chr8:130152897..130155055,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs11774875	0.84[AMR][1000 genomes]
rs11777036	0.84[AMR][1000 genomes]
rs11777951	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11784062	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11990860	0.81[AMR][1000 genomes]
rs11994022	0.88[AMR][1000 genomes]
rs11997291	0.81[AMR][1000 genomes]
rs34709271	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4354273	0.81[AMR][1000 genomes]
rs4418312	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4493879	0.84[AMR][1000 genomes]
rs4617118	0.89[EUR][1000 genomes]
rs55708957	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs55870212	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs56000240	0.81[AMR][1000 genomes]
rs56099035	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs56308035	0.84[AMR][1000 genomes]
rs62525713	0.81[AMR][1000 genomes]
rs62525715	0.81[AMR][1000 genomes]
rs62525716	0.81[AMR][1000 genomes]
rs62525721	0.84[AMR][1000 genomes]
rs62525724	0.84[AMR][1000 genomes]
rs62525745	0.84[AMR][1000 genomes]
rs72730206	0.87[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs72730211	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72730214	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs72730215	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72730217	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72730218	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891443	chr8:130016499-130220746	Weak transcription Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv891445	chr8:130152109-130224721	Enhancers ZNF genes & repeats Genic enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130126400-130160600	Weak transcription	Fetal Thymus	thymus
2	chr8:130146000-130158800	Genic enhancers	Dnd41	blood
3	chr8:130149200-130154400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr8:130149200-130154400	Weak transcription	Muscle Satellite Cultured Cells	--
5	chr8:130149400-130154400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr8:130150200-130154600	Weak transcription	Fetal Muscle Leg	muscle
7	chr8:130151400-130158000	Weak transcription	Thymus	Thymus
8	chr8:130154200-130154800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
9	chr8:130154200-130154800	Enhancers	Fetal Brain Male	brain
10	chr8:130154200-130154800	Enhancers	NHLF	lung

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