The 2.0 version of rSNPBase

Variant report

Variant rs72797536
Chromosome Location chr2:55369129-55369130
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:55361400-55370200 Enhancers Fetal Intestine Large intestine
2 chr2:55361800-55373000 Weak transcription HSMMtube muscle
3 chr2:55361800-55378600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr2:55363800-55370400 Enhancers Duodenum Mucosa Duodenum
5 chr2:55365200-55369200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr2:55365200-55381000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr2:55365600-55378600 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr2:55366200-55378600 Weak transcription Colon Smooth Muscle Colon
9 chr2:55366600-55369200 Weak transcription Fetal Lung lung
10 chr2:55366800-55369400 Enhancers Brain Anterior Caudate brain
11 chr2:55366800-55373400 Weak transcription Rectal Smooth Muscle rectum
12 chr2:55367200-55370000 Enhancers Brain Substantia Nigra brain
13 chr2:55367200-55378800 Weak transcription Placenta Placenta
14 chr2:55367600-55369400 Enhancers Rectal Mucosa Donor 29 rectum
15 chr2:55367600-55369400 Enhancers Dnd41 blood
16 chr2:55367600-55369800 Enhancers Fetal Intestine Small intestine
17 chr2:55367600-55370000 Enhancers Stomach Mucosa stomach
18 chr2:55367800-55375000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr2:55368200-55369400 Enhancers Esophagus oesophagus
20 chr2:55368200-55369400 Enhancers Right Atrium heart
21 chr2:55368400-55369200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr2:55368400-55369800 Enhancers Small Intestine intestine
23 chr2:55368400-55370000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
24 chr2:55368400-55370000 Enhancers Rectal Mucosa Donor 31 rectum
25 chr2:55368600-55369400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr2:55368600-55369400 Enhancers Pancreas Pancrea
27 chr2:55368600-55369800 Enhancers Stomach Smooth Muscle stomach
28 chr2:55368600-55369800 Bivalent Enhancer HepG2 liver
29 chr2:55368600-55370000 Enhancers Primary T helper naive cells fromperipheralblood blood
30 chr2:55368600-55370000 Enhancers Fetal Adrenal Gland Adrenal Gland
31 chr2:55368600-55370000 Enhancers Sigmoid Colon Sigmoid Colon
32 chr2:55368800-55369200 Enhancers HUES6 Cell Line embryonic stem cell
33 chr2:55368800-55369400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
34 chr2:55368800-55369400 Enhancers Primary T cells fromperipheralblood blood
35 chr2:55368800-55369600 Enhancers Primary T helper naive cells from peripheral blood blood
36 chr2:55368800-55369600 Enhancers Primary T helper cells fromperipheralblood blood
37 chr2:55368800-55369800 Enhancers Fetal Stomach stomach
38 chr2:55368800-55369800 Enhancers A549 lung
39 chr2:55368800-55370200 Enhancers Primary T regulatory cells fromperipheralblood blood
40 chr2:55368800-55370200 Weak transcription Brain Hippocampus Middle brain
41 chr2:55369000-55369200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
42 chr2:55369000-55369200 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
43 chr2:55369000-55369600 Enhancers Primary T killer naive cells fromperipheralblood blood
44 chr2:55369000-55369600 Enhancers Hela-S3 cervix
45 chr2:55369000-55369800 Enhancers Primary T helper cells PMA-I stimulated --
46 chr2:55369000-55370600 Enhancers K562 blood

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Last update: Aug 31, 2015