Variant report

No.	Distal block	Cell Line	Cell type
1	chr2:172033128..172034905-chr2:172053758..172055299,2	K562	blood:
2	chr2:172014804..172017655-chr2:172034018..172036409,2	MCF-7	breast:
3	chr2:172026236..172029009-chr2:172032109..172035323,3	K562	blood:

Variant related genes	Relation type
ENSG00000198586	Chromatin interaction

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10171850	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10177560	0.81[EUR][1000 genomes]
rs10183909	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10204062	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11883894	0.80[ASN][1000 genomes]
rs12469418	0.80[ASN][1000 genomes]
rs12477548	0.80[ASN][1000 genomes]
rs12477555	0.80[ASN][1000 genomes]
rs12477649	0.83[ASN][1000 genomes]
rs13410683	0.82[ASN][1000 genomes]
rs1989612	0.80[ASN][1000 genomes]
rs1989613	0.80[ASN][1000 genomes]
rs2356517	0.80[ASN][1000 genomes]
rs4331471	0.80[ASN][1000 genomes]
rs57335774	0.80[ASN][1000 genomes]
rs60091560	0.80[ASN][1000 genomes]
rs6433282	0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs728456	0.80[ASN][1000 genomes]
rs728457	0.80[ASN][1000 genomes]
rs7421377	0.83[ASN][1000 genomes]
rs7423767	0.80[ASN][1000 genomes]
rs7560360	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7582822	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7594071	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs930036	0.81[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs728455	TLK1	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:172030600-172035600	Weak transcription	GM12878-XiMat	blood
2	chr2:172031600-172036800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr2:172031600-172036800	Weak transcription	NHEK	skin
4	chr2:172031600-172037000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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