Variant report

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10200683	0.92[ASN][1000 genomes]
rs13399023	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs13405168	1.00[ASN][1000 genomes]
rs13416424	1.00[ASN][1000 genomes]
rs13419505	1.00[AMR][1000 genomes]
rs13427297	1.00[ASN][1000 genomes]
rs13428126	0.93[AMR][1000 genomes]
rs13430827	0.93[AMR][1000 genomes]
rs1991127	0.85[ASN][1000 genomes]
rs1991128	0.92[ASN][1000 genomes]
rs2005912	0.85[ASN][1000 genomes]
rs2194557	0.85[ASN][1000 genomes]
rs2194558	0.92[ASN][1000 genomes]
rs2194559	0.92[ASN][1000 genomes]
rs2194571	0.92[ASN][1000 genomes]
rs2338369	0.85[ASN][1000 genomes]
rs28361438	0.92[ASN][1000 genomes]
rs56149559	1.00[ASN][1000 genomes]
rs59932004	0.95[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6547698	0.92[ASN][1000 genomes]
rs6547699	0.85[ASN][1000 genomes]
rs6547710	0.85[ASN][1000 genomes]
rs6712593	1.00[AMR][1000 genomes]
rs6729222	0.92[ASN][1000 genomes]
rs6745563	1.00[ASN][1000 genomes]
rs728109	1.00[ASN][1000 genomes]
rs72892282	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs72892296	1.00[ASN][1000 genomes]
rs72894021	0.92[ASN][1000 genomes]
rs72894032	0.92[ASN][1000 genomes]
rs72894034	0.92[ASN][1000 genomes]
rs7563186	0.85[ASN][1000 genomes]
rs889961	0.85[ASN][1000 genomes]
rs889962	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1011486	chr2:21475803-22364002	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv535602	chr2:21475803-22364002	Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:21713200-21726600	Weak transcription	Aorta	Aorta
2	chr2:21720800-21721200	Enhancers	iPS-18 Cell Line	embryonic stem cell
3	chr2:21720800-21721200	Enhancers	Fetal Stomach	stomach

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