Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:46191150..46193434-chr11:46195184..46197537,2	MCF-7	breast:
2	chr11:46193270..46194903-chr11:46195956..46198162,2	K562	blood:

Variant related genes	Relation type
ENSG00000255314	Chromatin interaction

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10501317	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72906282	0.81[ASN][1000 genomes]
rs72908006	0.81[ASN][1000 genomes]
rs72908007	0.89[ASN][1000 genomes]
rs72908009	0.89[ASN][1000 genomes]
rs72908013	0.89[ASN][1000 genomes]
rs72908014	0.89[ASN][1000 genomes]
rs72908015	0.89[ASN][1000 genomes]
rs72908022	0.89[ASN][1000 genomes]
rs72908034	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72908050	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72908052	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72908065	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72908086	0.87[EUR][1000 genomes]
rs72908089	0.87[EUR][1000 genomes]
rs72908091	0.87[EUR][1000 genomes]
rs72908092	0.87[EUR][1000 genomes]
rs72908096	0.87[EUR][1000 genomes]
rs72908098	0.87[EUR][1000 genomes]
rs72908102	0.87[EUR][1000 genomes]
rs7943808	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051344	chr11:46188818-46306447	Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	diseases
2	nsv541028	chr11:46188818-46306447	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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