Variant report

Variant	rs72908034
Chromosome Location	chr11:46196725-46196726
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10501317	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72906282	0.93[ASN][1000 genomes]
rs72908006	0.93[ASN][1000 genomes]
rs72908007	1.00[ASN][1000 genomes]
rs72908009	1.00[ASN][1000 genomes]
rs72908013	1.00[ASN][1000 genomes]
rs72908014	1.00[ASN][1000 genomes]
rs72908015	1.00[ASN][1000 genomes]
rs72908022	1.00[ASN][1000 genomes]
rs72908033	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72908050	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72908052	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72908065	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72908086	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72908089	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72908091	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72908092	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72908096	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72908098	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72908102	0.87[EUR][1000 genomes]
rs7943808	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051344	chr11:46188818-46306447	Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	diseases
2	nsv541028	chr11:46188818-46306447	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:46196400-46197800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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