Variant report

Variant	rs72910622
Chromosome Location	chr4:100604904-100604905
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs2035813	0.95[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2130906	0.95[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2130907	0.95[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs41275703	0.95[AMR][1000 genomes]
rs41275705	0.95[AMR][1000 genomes]
rs58004852	1.00[AFR][1000 genomes]
rs72901505	1.00[AFR][1000 genomes]
rs72901515	1.00[AFR][1000 genomes]
rs72901556	1.00[AFR][1000 genomes]
rs72908758	0.95[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs72908762	0.95[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs72908793	1.00[AFR][1000 genomes]
rs72908799	1.00[AFR][1000 genomes]
rs72910604	0.88[AFR][1000 genomes]
rs72910610	0.93[AFR][1000 genomes]
rs72917463	1.00[AFR][1000 genomes]
rs72917485	1.00[AFR][1000 genomes]
rs72917501	1.00[AFR][1000 genomes]
rs72919303	0.81[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv933074	chr4:100460951-100630600	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:100600800-100605000	Weak transcription	Fetal Lung	lung
2	chr4:100601600-100608200	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr4:100603800-100605400	Enhancers	Fetal Heart	heart
4	chr4:100604600-100605000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr4:100604600-100605400	Enhancers	Fetal Muscle Trunk	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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