Variant report

Variant	rs72925360
Chromosome Location	chr4:128047183-128047184
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10518511	0.95[AFR][1000 genomes]
rs57642585	0.93[AFR][1000 genomes]
rs58127671	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58916718	0.95[AFR][1000 genomes]
rs58944195	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60943407	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72925318	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72925319	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72925320	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72925322	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72925325	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72925343	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72925354	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72925362	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72925363	1.00[AFR][1000 genomes]
rs72925366	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72925368	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72925375	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72925376	1.00[AMR][1000 genomes]
rs72925383	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879914	chr4:128005362-128123638	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:128042000-128047600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr4:128045800-128047800	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr4:128046000-128047800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr4:128046200-128047400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr4:128046400-128047600	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr4:128046400-128047800	Enhancers	iPS-18 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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