Variant report
| Variant | rs72936078 |
|---|---|
| Chromosome Location | chr2:39961304-39961305 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:39942000-39963000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 2 | chr2:39944400-39976600 | Weak transcription | Fetal Brain Male | brain |
| 3 | chr2:39951000-39963600 | Weak transcription | Pancreas | Pancrea |
| 4 | chr2:39951000-39964800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 5 | chr2:39951200-39964800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 6 | chr2:39951400-39961400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 7 | chr2:39951400-39961800 | Weak transcription | Colon Smooth Muscle | Colon |
| 8 | chr2:39951400-39962000 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 9 | chr2:39951400-39963800 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 10 | chr2:39952000-39964800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 11 | chr2:39952400-39962400 | Weak transcription | Spleen | Spleen |
| 12 | chr2:39952600-39962600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 13 | chr2:39952800-39962400 | Weak transcription | Fetal Kidney | kidney |
| 14 | chr2:39952800-39962600 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 15 | chr2:39953200-39962400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 16 | chr2:39956000-39962800 | Weak transcription | HUVEC | blood vessel |
| 17 | chr2:39956200-39962200 | Weak transcription | Adipose Nuclei | Adipose |
| 18 | chr2:39956200-39966400 | Weak transcription | Small Intestine | intestine |
| 19 | chr2:39956400-39962600 | Weak transcription | Placenta | Placenta |
| 20 | chr2:39956600-39962000 | Weak transcription | Primary B cells from peripheral blood | blood |
| 21 | chr2:39956600-39962000 | Weak transcription | NH-A | brain |
| 22 | chr2:39956600-39962800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 23 | chr2:39956600-39963400 | Weak transcription | Ovary | ovary |
| 24 | chr2:39956800-39964600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 25 | chr2:39957400-39971200 | Strong transcription | Primary T cells from cord blood | blood |
| 26 | chr2:39957600-39963200 | Strong transcription | Fetal Lung | lung |
| 27 | chr2:39957600-39964200 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 28 | chr2:39957800-39962400 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 29 | chr2:39958400-39963800 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 30 | chr2:39958600-39962600 | Weak transcription | Hela-S3 | cervix |
| 31 | chr2:39958800-39962000 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 32 | chr2:39958800-39962600 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 33 | chr2:39958800-39962600 | Genic enhancers | Osteobl | bone |
| 34 | chr2:39958800-39964400 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 35 | chr2:39958800-39964600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 36 | chr2:39959000-39961600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 37 | chr2:39959000-39971200 | Strong transcription | Fetal Thymus | thymus |
| 38 | chr2:39959200-39961400 | Genic enhancers | HSMM | muscle |
| 39 | chr2:39959200-39961600 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 40 | chr2:39959200-39961800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 41 | chr2:39959400-39966400 | Strong transcription | Fetal Intestine Large | intestine |
| 42 | chr2:39959400-39967400 | Strong transcription | A549 | lung |
| 43 | chr2:39959400-39971000 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 44 | chr2:39959400-39974200 | Strong transcription | Primary B cells from cord blood | blood |
| 45 | chr2:39959600-39963800 | Weak transcription | Esophagus | oesophagus |
| 46 | chr2:39959600-39967200 | Strong transcription | HepG2 | liver |
| 47 | chr2:39959800-39961800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 48 | chr2:39959800-39967000 | Genic enhancers | Breast Myoepithelial Primary Cells | Breast |
| 49 | chr2:39960000-39961400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 50 | chr2:39960000-39961400 | Strong transcription | Lung | lung |
