Variant report
| Variant | rs58054718 |
|---|---|
| Chromosome Location | chr2:39932950-39932951 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:39923600-39935200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 2 | chr2:39925000-39957600 | Weak transcription | Fetal Stomach | stomach |
| 3 | chr2:39925200-39950000 | Weak transcription | Left Ventricle | heart |
| 4 | chr2:39931400-39934200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 5 | chr2:39931400-39937600 | Weak transcription | Brain Anterior Caudate | brain |
| 6 | chr2:39931400-39941200 | Weak transcription | Brain Hippocampus Middle | brain |
| 7 | chr2:39931400-39957600 | Weak transcription | Fetal Muscle Leg | muscle |
| 8 | chr2:39931600-39933400 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 9 | chr2:39931600-39934200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 10 | chr2:39931600-39945800 | Weak transcription | Aorta | Aorta |
| 11 | chr2:39932200-39934600 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 12 | chr2:39932600-39933400 | Strong transcription | HSMMtube | muscle |
| 13 | chr2:39932800-39933000 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 14 | chr2:39932800-39933000 | ZNF genes & repeats | H9 Derived Neuron Cultured Cells | ES cell derived |
| 15 | chr2:39932800-39933200 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 16 | chr2:39932800-39933400 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 17 | chr2:39932800-39933400 | Enhancers | Fetal Thymus | thymus |
| 18 | chr2:39932800-39933400 | Enhancers | NHEK | skin |
| 19 | chr2:39932800-39933600 | Bivalent Enhancer | HepG2 | liver |
| 20 | chr2:39932800-39933600 | Enhancers | HMEC | breast |
| 21 | chr2:39932800-39934600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
