The 2.0 version of rSNPBase

Variant report

Variant rs72938112
Chromosome Location chr2:39983861-39983862
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:39960200-39987200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr2:39961400-39984200 Weak transcription Colonic Mucosa Colon
3 chr2:39962200-39986800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr2:39962200-39993200 Strong transcription Liver Liver
5 chr2:39964200-39984200 Weak transcription Psoas Muscle Psoas
6 chr2:39965200-40005000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr2:39965200-40005400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr2:39965400-39984200 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr2:39967600-39991200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr2:39969800-39999800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr2:39971000-39999800 Weak transcription Right Ventricle heart
12 chr2:39971600-39998800 Strong transcription HUES64 Cell Line embryonic stem cell
13 chr2:39972400-39998600 Strong transcription HMEC breast
14 chr2:39972400-39998800 Strong transcription Monocytes-CD14+_RO01746 blood
15 chr2:39973000-39998800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr2:39974200-39998600 Strong transcription HUES48 Cell Line embryonic stem cell
17 chr2:39974600-39994000 Strong transcription Fetal Thymus thymus
18 chr2:39975000-39998400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr2:39975000-39999800 Strong transcription Primary hematopoietic stem cells short term culture blood
20 chr2:39975200-39987200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr2:39975200-39987400 Strong transcription Fetal Lung lung
22 chr2:39975200-39987400 Strong transcription Fetal Muscle Trunk muscle
23 chr2:39975200-39989000 Strong transcription Primary T cells fromperipheralblood blood
24 chr2:39975200-39989800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr2:39975200-39993800 Strong transcription Primary monocytes fromperipheralblood blood
26 chr2:39975400-39987800 Strong transcription Fetal Intestine Large intestine
27 chr2:39975400-39997000 Strong transcription HUES6 Cell Line embryonic stem cell
28 chr2:39975800-39985800 Strong transcription Fetal Brain Female brain
29 chr2:39975800-39989400 Strong transcription A549 lung
30 chr2:39975800-39994600 Strong transcription Breast Myoepithelial Primary Cells Breast
31 chr2:39976000-39988600 Strong transcription HepG2 liver
32 chr2:39976000-39988800 Strong transcription Duodenum Mucosa Duodenum
33 chr2:39976000-39989800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr2:39976000-39993200 Strong transcription Placenta Placenta
35 chr2:39976000-39993400 Strong transcription Adipose Nuclei Adipose
36 chr2:39976200-39987800 Strong transcription Primary B cells from peripheral blood blood
37 chr2:39976200-39987800 Strong transcription Fetal Adrenal Gland Adrenal Gland
38 chr2:39976200-39995400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr2:39976200-39998800 Strong transcription iPS-20b Cell Line embryonic stem cell
40 chr2:39976400-39992000 Strong transcription K562 blood
41 chr2:39976600-39987200 Strong transcription Primary hematopoietic stem cells blood
42 chr2:39976600-39992000 Strong transcription Primary B cells from cord blood blood
43 chr2:39976800-39987600 Strong transcription Rectal Mucosa Donor 31 rectum
44 chr2:39976800-39988800 Strong transcription iPS-18 Cell Line embryonic stem cell
45 chr2:39976800-39999000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
46 chr2:39977000-39987600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr2:39977000-39990000 Strong transcription Fetal Muscle Leg muscle
48 chr2:39977200-39988000 Strong transcription Primary T regulatory cells fromperipheralblood blood
49 chr2:39977200-39989000 Strong transcription Primary T helper cells fromperipheralblood blood
50 chr2:39977400-39986000 Strong transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015