The 2.0 version of rSNPBase

Variant report

Variant rs72938134
Chromosome Location chr2:39999569-39999570
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:39965200-40005000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr2:39965200-40005400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr2:39969800-39999800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr2:39971000-39999800 Weak transcription Right Ventricle heart
5 chr2:39975000-39999800 Strong transcription Primary hematopoietic stem cells short term culture blood
6 chr2:39978600-40000000 Weak transcription Fetal Heart heart
7 chr2:39984800-39999600 Weak transcription Placenta Amnion Placenta Amnion
8 chr2:39985000-40005000 Weak transcription Colonic Mucosa Colon
9 chr2:39985200-39999600 Weak transcription Brain Germinal Matrix brain
10 chr2:39985200-39999600 Weak transcription Psoas Muscle Psoas
11 chr2:39985200-39999800 Weak transcription Brain Substantia Nigra brain
12 chr2:39985200-40005000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr2:39985400-40005200 Weak transcription Fetal Brain Male brain
14 chr2:39985600-40001000 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr2:39985800-39999600 Weak transcription Brain Angular Gyrus brain
16 chr2:39985800-39999800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr2:39985800-39999800 Weak transcription Small Intestine intestine
18 chr2:39985800-40004800 Weak transcription Fetal Brain Female brain
19 chr2:39985800-40005000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr2:39985800-40005400 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr2:39985800-40005400 Weak transcription Lung lung
22 chr2:39986000-40004200 Weak transcription Brain Cingulate Gyrus brain
23 chr2:39986200-40004400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr2:39987400-39999800 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr2:39987400-39999800 Weak transcription Brain Inferior Temporal Lobe brain
26 chr2:39987400-40001000 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr2:39987400-40001000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr2:39987600-40001000 Weak transcription Primary T killer memory cells from peripheral blood blood
29 chr2:39987600-40003200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr2:39988000-39999600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr2:39988000-40004400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr2:39988200-39999600 Weak transcription Colon Smooth Muscle Colon
33 chr2:39991200-40000200 Strong transcription A549 lung
34 chr2:39992000-40004400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr2:39992000-40004600 Weak transcription Fetal Kidney kidney
36 chr2:39995400-40000000 Strong transcription Primary B cells from cord blood blood
37 chr2:39995400-40000200 Strong transcription Fetal Thymus thymus
38 chr2:39995800-39999800 Strong transcription Dnd41 blood
39 chr2:39996200-39999600 Weak transcription Brain Anterior Caudate brain
40 chr2:39996400-39999600 Weak transcription Adipose Nuclei Adipose
41 chr2:39996400-39999800 Weak transcription Gastric stomach
42 chr2:39996400-40001000 Weak transcription Rectal Smooth Muscle rectum
43 chr2:39996400-40004200 Weak transcription Stomach Smooth Muscle stomach
44 chr2:39996400-40005000 Weak transcription Stomach Mucosa stomach
45 chr2:39996600-40004600 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr2:39996800-39999800 Weak transcription Fetal Muscle Leg muscle
47 chr2:39997000-39999600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr2:39997000-39999600 Weak transcription Fetal Lung lung
49 chr2:39997000-39999600 Weak transcription Left Ventricle heart
50 chr2:39997000-39999800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015