The 2.0 version of rSNPBase

Variant report

Variant rs72957672
Chromosome Location chr2:99528818-99528819
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:99523800-99530000 Enhancers Fetal Muscle Leg muscle
2 chr2:99524400-99534400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr2:99524600-99532400 Enhancers Pancreas Pancrea
4 chr2:99525200-99530600 Enhancers Primary T killer naive cells fromperipheralblood blood
5 chr2:99525800-99529600 Weak transcription Brain Angular Gyrus brain
6 chr2:99526000-99530400 Enhancers Brain Anterior Caudate brain
7 chr2:99526000-99530800 Enhancers Spleen Spleen
8 chr2:99526400-99529000 Enhancers Fetal Intestine Large intestine
9 chr2:99526400-99530200 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr2:99526400-99534200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
11 chr2:99526600-99529000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr2:99526600-99529800 Enhancers HUVEC blood vessel
13 chr2:99526600-99530400 Weak transcription H1 Cell Line embryonic stem cell
14 chr2:99526600-99530400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr2:99526600-99533400 Weak transcription Left Ventricle heart
16 chr2:99526800-99529600 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr2:99527200-99530200 Enhancers Primary T helper 17 cells PMA-I stimulated --
18 chr2:99527200-99530800 Bivalent Enhancer Primary T cells fromperipheralblood blood
19 chr2:99527200-99531000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr2:99527200-99532000 Bivalent Enhancer Fetal Muscle Trunk muscle
21 chr2:99527200-99533600 Enhancers Esophagus oesophagus
22 chr2:99527600-99530200 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
23 chr2:99527600-99531400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr2:99527800-99529000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
25 chr2:99527800-99529200 Enhancers Fetal Lung lung
26 chr2:99527800-99529400 Enhancers Skeletal Muscle Female skeletal muscle
27 chr2:99528000-99530200 Enhancers NHDF-Ad bronchial
28 chr2:99528000-99530400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr2:99528000-99530600 Enhancers HSMMtube muscle
30 chr2:99528000-99534000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr2:99528200-99529000 Enhancers NHLF lung
32 chr2:99528200-99529200 Enhancers A549 lung
33 chr2:99528200-99529200 Flanking Active TSS NHEK skin
34 chr2:99528200-99529400 Enhancers Primary T killer memory cells from peripheral blood blood
35 chr2:99528200-99529600 Enhancers Primary T cells from cord blood blood
36 chr2:99528200-99530000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr2:99528200-99530800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
38 chr2:99528200-99531000 Enhancers Breast Myoepithelial Primary Cells Breast
39 chr2:99528200-99534400 Enhancers Cortex derived primary cultured neurospheres brain
40 chr2:99528400-99529000 Enhancers Pancreatic Islets Pancreatic Islet
41 chr2:99528400-99529200 Bivalent Enhancer Fetal Stomach stomach
42 chr2:99528400-99529200 Flanking Active TSS HMEC breast
43 chr2:99528400-99529600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
44 chr2:99528400-99530800 Enhancers Fetal Brain Male brain
45 chr2:99528400-99532000 Enhancers Gastric stomach
46 chr2:99528600-99529000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
47 chr2:99528600-99529000 Flanking Active TSS HSMM muscle
48 chr2:99528600-99529000 Flanking Active TSS NH-A brain
49 chr2:99528600-99529200 Flanking Active TSS Muscle Satellite Cultured Cells --
50 chr2:99528600-99529200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015