The 2.0 version of rSNPBase

Variant report

Variant rs72958646
Chromosome Location chr2:99421888-99421889
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:99407600-99423800 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr2:99409200-99425800 Weak transcription Small Intestine intestine
3 chr2:99409600-99426400 Weak transcription Esophagus oesophagus
4 chr2:99411200-99422200 Weak transcription Colon Smooth Muscle Colon
5 chr2:99413800-99422000 Weak transcription Duodenum Mucosa Duodenum
6 chr2:99413800-99423800 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr2:99414000-99426600 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr2:99414200-99422200 Weak transcription Fetal Intestine Large intestine
9 chr2:99414600-99422000 Weak transcription Fetal Brain Male brain
10 chr2:99416400-99422000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr2:99418000-99422200 Weak transcription Psoas Muscle Psoas
12 chr2:99418000-99442200 Weak transcription Stomach Mucosa stomach
13 chr2:99418200-99423800 Weak transcription Thymus Thymus
14 chr2:99418800-99422200 Weak transcription Gastric stomach
15 chr2:99418800-99425000 Weak transcription Fetal Intestine Small intestine
16 chr2:99419800-99422200 Enhancers Fetal Muscle Trunk muscle
17 chr2:99419800-99423400 Enhancers HepG2 liver
18 chr2:99420000-99423400 Enhancers Liver Liver
19 chr2:99420000-99424000 Enhancers Pancreas Pancrea
20 chr2:99420200-99423400 Enhancers Lung lung
21 chr2:99420200-99425000 Enhancers Primary monocytes fromperipheralblood blood
22 chr2:99420400-99423800 Enhancers Fetal Muscle Leg muscle
23 chr2:99420800-99424200 Enhancers Fetal Heart heart
24 chr2:99420800-99426800 Enhancers Fetal Thymus thymus
25 chr2:99421000-99424000 Enhancers Left Ventricle heart
26 chr2:99421200-99423000 Enhancers Right Atrium heart
27 chr2:99421200-99423200 Enhancers Primary hematopoietic stem cells short term culture blood
28 chr2:99421200-99423400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
29 chr2:99421200-99423400 Enhancers Primary B cells from cord blood blood
30 chr2:99421200-99424000 Enhancers Adipose Nuclei Adipose
31 chr2:99421200-99425000 Enhancers HMEC breast
32 chr2:99421200-99427200 Enhancers Breast Myoepithelial Primary Cells Breast
33 chr2:99421400-99422600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
34 chr2:99421400-99423200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr2:99421400-99423200 Enhancers Placenta Placenta
36 chr2:99421400-99423400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr2:99421400-99423600 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
38 chr2:99421400-99424000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr2:99421600-99422800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr2:99421600-99422800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr2:99421600-99422800 Enhancers Stomach Smooth Muscle stomach
42 chr2:99421600-99422800 Enhancers Hela-S3 cervix
43 chr2:99421600-99423200 Enhancers NHEK skin
44 chr2:99421600-99423600 Enhancers Skeletal Muscle Male skeletal muscle
45 chr2:99421600-99424000 Enhancers Brain Hippocampus Middle brain
46 chr2:99421600-99424000 Enhancers Fetal Lung lung
47 chr2:99421800-99422400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr2:99421800-99422400 Enhancers Pancreatic Islets Pancreatic Islet
49 chr2:99421800-99422800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
50 chr2:99421800-99423000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015