Variant report

Variant	rs73018304
Chromosome Location	chr3:159151186-159151187
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs16830127	1.00[AMR][1000 genomes]
rs58552621	1.00[AMR][1000 genomes]
rs58628875	1.00[AMR][1000 genomes]
rs59241830	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59460788	1.00[AMR][1000 genomes]
rs61049877	1.00[AMR][1000 genomes]
rs61498446	1.00[AMR][1000 genomes]
rs73012448	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73012471	1.00[AMR][1000 genomes]
rs73012478	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73014360	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73016391	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73018382	1.00[AMR][1000 genomes]
rs73024348	1.00[AMR][1000 genomes]
rs73024354	1.00[AMR][1000 genomes]
rs73031428	1.00[AMR][1000 genomes]
rs73031430	1.00[AMR][1000 genomes]
rs73031437	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv470971	chr3:158590928-159158217	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
2	nsv998949	chr3:158774806-159394550	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases
3	nsv1004990	chr3:159090974-159174954	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:159149600-159151800	Enhancers	Fetal Brain Male	brain
2	chr3:159149800-159151600	Enhancers	Fetal Brain Female	brain
3	chr3:159149800-159151800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr3:159149800-159152400	Enhancers	Cortex derived primary cultured neurospheres	brain
5	chr3:159150200-159151400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr3:159150400-159151200	Enhancers	Brain Germinal Matrix	brain
7	chr3:159150600-159151800	Enhancers	Fetal Kidney	kidney
8	chr3:159150800-159151200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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